| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2983 |
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| Symbol | |
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| ID | 4605230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3553380 |
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| End bp | 3555863 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782394 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_928855 |
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| Protein GI | 119776115 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAA GCCGTCGCGA GTTTCTTAAA GCCAATGCCG CCGTGGCTGC GGCCACGGCA
GTGGGTGTCA CTCTGCCAGT GAAAGTGGTT GAAGCCGCTG AGCAGAAGGA CAACATCAAA
TGGGACAAGG CCCCCTGCCG TTTCTGTGGC GTGGGCTGTT CGGTGCTGGT TGGCACCCGG
GACGGCAAAG TGGTTGCCAC CAAGGGCGAC CCCGAAAGCC CGGTCAACAA GGGCCTGAAC
TGTATCAAGG GCTACTTCCT GTCGAAAATC ATGTACGGCA AAGACCGTCT GGACACGCCG
CTTTTGCGCA TGAAAGATGG CAAGTACGAC AAGAACGGCG AATTCACCCC GGTGAGCTGG
GACGTGGCGC TGGACACCAT GGCCGACAAG TGGAAAGCCA GCCTCAAGGC CAAGGGTCCA
ACCTCTGTAG GTATGTTCGG ATCGGGCCAG TGGACCATCT GGGAAGGCTA TGCCGCCGCC
AAACTGCACA AGGCCGGTTT CCTCACCAAT AACATCGACC CCAATGCCCG TCACTGCATG
GCCTCGGCCG TAGGCGCCTT TATGCGTACC TTCGGTATTG ACGAGCCCAT GGGCTGCTAT
GACGACCTCG AAGCCGCCGA CCACTTTGTG CTCTGGGGCG CCAACATGGC CGAGATGCAC
CCGATCCTGT GGGCGCGCCT GTCTGACCGT CGCCTGAGCA ATCCCAACGG CAAGGTGCAT
GTGCTCTCTA CCTTCGAGAA CCGCTCCTTC GATCTGGCCG ATAACCCCAT GGTATTCCGT
CCGCAAACGG ACATGATTAT CCTGAACTTT ATCGCCAACT ACATCATCCA GAACAAGGCG
GTAAACAAGG ACTTTGTCAG CAAGCACACC AACTTCGCTT TGGGTGTGAC CGACATAGGT
TATGGTCTGC GCCCTGACCA TCCGCTGGAG ATGAAGGCCA AGAACCCAGG CAACGGCAAA
TCCACCCCGA TTTCCTTCGA CGAATACGCC AAGTTTGTCA GCACCTATAC CCTGGAATAC
GCCAGCGAAA TGAGTGGTGT ACCGGCAGAG CGTTTGGTTG AGTTGGCCAA GGCCTATGCC
GACCCAAGCG TGAAGGTGAT GAGCCTGTGG ACCATGGGGG TGAACCAGCA CGTGCGTGGT
GTGTGGACCA ACAACATGAT CTACAACATC CACCTGCTGA CCGGCAAAAT CGCCACCCCG
GGCAACAGCC CCTTCTCACT CACCGGTCAG CCATCGGCCT GTGGTACCGC CCGTGAAGTG
GGTACCTTTG CCCACCGTCT GCCCGCCGAC ATGGTGGTGG CCAACGACAA GCACCGCGCC
ATTACCGAAA AACTCTGGCA GCTGCCGGAA GGCACCATTC CGCCCAAGCC CGGCTTCCAC
GCCGTGCTGC AAAGCCGGAT GCTCAAAGAC GGCAAGCTGA ACTGTTACTG GACCATGTGT
ACCAACAATA TGCAGGCCGG TCCCAACATC AACGATGAAA TCTACCCGGG CTTCCGTAAC
CCGGAAAACT TCATCGTGGT ATCAGACCCT TACCCAACGG TGACTGCCAT GGCCGCCGAC
CTGATTCTGC CTACCGCCAT GTGGGTGGAA AAAGAAGGTG CCTACGGTAA CGCCGAGCGC
CGTACCCATA TGTGGCACCA GCAGGTGAAG GCACCGGAAG GCGCCAAGTC TGATCTGTGG
CAGCTGATGG AATTCGCCAA GCGCTTCACC GTGGATGAAG TCTGGCCCGC CGAGCTGCTG
GCCAAGAAGC CAGAATACGC CGGTAAGACC CTGTATCAGG TGCTGTTTGC CAACGGCGTT
ATCGACAAGT ATCCAATCTC TGACTGCAAG GGCGAGCTGA ACGATGAGTC CGAGCACTTC
GGCTTCTACG TACAGAAGGG CATTTTCGAA GAATATGCCG CCTTCGGTCG CGGCAAGGCC
CACGATCTGG CAGCCTTCGA CGACTACCAC GCCAGCAGAG GTCTGCGCTG GCCAGTGGTG
GATGGCAAGG AAACCCTGCG CCGCTTCGTT GAGGGTTCCG ACCCCTATGT GAAGGCCGGT
GAAGGCTTTA AGTTCTACGG TAAGCCCGAT GGCAAGGCGG TGATTTTCGC CCTGCCTTAC
GAGCCAGCCG CCGAAGAGCC GAACGATGAA TACGATCTGT GGATGAGCAC AGGCCGGGTA
CTGGAACACT GGCACACCGC CTCCATGACA GCACGGGTAC CTGAGCTCTA CCGCGCTTAC
CCTGACGCGC AGATCTTTAT GCACCCTGAA GACGCCAAGG CCCGTGGCCT GAACCGTGGC
GACGAGGTAA TAGTGGCCTC TCCACGGGGT GAAGTGAAGA CACGTGTCGA AACCAAGGGC
CGCAACAAGC CACCCCGTGG CGTGGTGTTT ATGCCCTTCT TCGACGCCCG TCAGCTGGTG
AACAAGCTGC TGCTGGACGC GACCGATCCT CTGTCAAAAG AGACAGACTT CAAGAAGTGT
CCGGTGAAGG TGATGAAGGC CTGA
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| Protein sequence | MSISRREFLK ANAAVAAATA VGVTLPVKVV EAAEQKDNIK WDKAPCRFCG VGCSVLVGTR
DGKVVATKGD PESPVNKGLN CIKGYFLSKI MYGKDRLDTP LLRMKDGKYD KNGEFTPVSW
DVALDTMADK WKASLKAKGP TSVGMFGSGQ WTIWEGYAAA KLHKAGFLTN NIDPNARHCM
ASAVGAFMRT FGIDEPMGCY DDLEAADHFV LWGANMAEMH PILWARLSDR RLSNPNGKVH
VLSTFENRSF DLADNPMVFR PQTDMIILNF IANYIIQNKA VNKDFVSKHT NFALGVTDIG
YGLRPDHPLE MKAKNPGNGK STPISFDEYA KFVSTYTLEY ASEMSGVPAE RLVELAKAYA
DPSVKVMSLW TMGVNQHVRG VWTNNMIYNI HLLTGKIATP GNSPFSLTGQ PSACGTAREV
GTFAHRLPAD MVVANDKHRA ITEKLWQLPE GTIPPKPGFH AVLQSRMLKD GKLNCYWTMC
TNNMQAGPNI NDEIYPGFRN PENFIVVSDP YPTVTAMAAD LILPTAMWVE KEGAYGNAER
RTHMWHQQVK APEGAKSDLW QLMEFAKRFT VDEVWPAELL AKKPEYAGKT LYQVLFANGV
IDKYPISDCK GELNDESEHF GFYVQKGIFE EYAAFGRGKA HDLAAFDDYH ASRGLRWPVV
DGKETLRRFV EGSDPYVKAG EGFKFYGKPD GKAVIFALPY EPAAEEPNDE YDLWMSTGRV
LEHWHTASMT ARVPELYRAY PDAQIFMHPE DAKARGLNRG DEVIVASPRG EVKTRVETKG
RNKPPRGVVF MPFFDARQLV NKLLLDATDP LSKETDFKKC PVKVMKA
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