Gene Sama_2981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2981 
Symbol 
ID4605228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3550584 
End bp3551951 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content58% 
IMG OID639782392 
ProductNa(+)-translocating NADH-quinone reductase subunit A 
Protein accessionYP_928853 
Protein GI119776113 
COG category[C] Energy production and conversion 
COG ID[COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA 
TIGRFAM ID[TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATT ATTCCGAAGC GATAATCACA GTGAAAAAGG GCCTGGATGT GCCCATTGCA 
GGTGCGCCAA GGCAAGAGAT AGACATAGCC GCCAAACCTT CCCAATTGGC CTTGCTTGGC
AAGGAGTATG TGGGGCTTAA GCCTTCCATG CTGGTGGAAG AGGGCGAGCG GGTCATCAAG
GGTCAGGCGC TGTTTGAAGA CAAGAGCAAC CCGGGTGTGC GCTTTACCGC GCCCTGCGCC
GGGATTGTGT CTGCTATCCA CAGAGGCGAC AAACGCTTGC TGCTGTCGGT GGTCATCGAT
TGTGATGGCT CTGATGAGAG CATCGACTTT GGCGTTGAGG CAAACCTTGC CGCCCTGTCC
CGAGAGCAGG TGCAGGACAA ACTGCTGCAA AGTGGTTTGT GGACCGCACT TCGCACCCGT
CCATTCTCCC GCGCGCCCAA ACCGGGCTCA GCGCCTGCCG GTCTGTTTGT TACGGCGGTT
GACACCAATC CGCTGGCCGC TGATCCGCGC ATTATTATCA ATACCGATGT GGATGCATTC
GCCGCCGGTA TGCAGGTACT TACTCACCTC ACCGACGGGC CTGTGTTTTT GTGTCAGGAC
GGTAATCATG AGCTGCTGCC GGGTGCCGAA CTGCCGCGGG TGCAAACCCA CAGATTCCAG
GGTGTGCACC CTGCTGGGTT AGTGGGCACT CACATTCATA TGCTGATGCC CGTCAGCATG
GAGCGTCAGG TGTGGCACAT AGGCTATCAG GACGTGATGG CCGTCGGTCG CCTCTTTACC
ACGGGACAGC TGGATAACCG CCGCATCGTG TCCCTTGCCG GCCCCAATGT GCTTAAGCCA
AGGCTGATTG CCACAGTGCT GGGTGCCAAG GTCAGCGATC TGGTGAAGGG TGAGCTCAAA
GACGAGGTAC ATTCCCGCGT GGTATCCGGC TCAGTGCTTT CTGGCCATAC CGCCCGCGGC
GCCTTTGATT TTCTCGGTCG CTTCCATCCA CAGATTTCGG TTGTTACCGA AGATGACAGC
GAGCAATTCC TGCCCTGGGT TCGCCTTGGC CGGGACAAGT TCTCCATCAC CCGTACTGTG
CTGTCGCGTT TTTTGCCCAA AAAGCTCTAC GACATGACCA CCCATACCGG CGGTGCCAAG
CGTGCCATGA TGGCCTTCGG TCAGCTGGAC CGGGTGATGC CGCTGGATAT TCTGCCCACT
CTGCTGGTGC GGGATCTGGT GGTACGTGAC ACCGACGAGG CGCAGCTTTT GGGCGCGCTG
GAGCTGGATG AAGAAGATTT GGCGCTGTGC ACCTTCGTGT GCCCCAGTAA GTACGATTTT
GGCCAGGAGC TTCGCGCCTG CCTGACGATT ATCGAGAGGG AAGGCTAA
 
Protein sequence
MADYSEAIIT VKKGLDVPIA GAPRQEIDIA AKPSQLALLG KEYVGLKPSM LVEEGERVIK 
GQALFEDKSN PGVRFTAPCA GIVSAIHRGD KRLLLSVVID CDGSDESIDF GVEANLAALS
REQVQDKLLQ SGLWTALRTR PFSRAPKPGS APAGLFVTAV DTNPLAADPR IIINTDVDAF
AAGMQVLTHL TDGPVFLCQD GNHELLPGAE LPRVQTHRFQ GVHPAGLVGT HIHMLMPVSM
ERQVWHIGYQ DVMAVGRLFT TGQLDNRRIV SLAGPNVLKP RLIATVLGAK VSDLVKGELK
DEVHSRVVSG SVLSGHTARG AFDFLGRFHP QISVVTEDDS EQFLPWVRLG RDKFSITRTV
LSRFLPKKLY DMTTHTGGAK RAMMAFGQLD RVMPLDILPT LLVRDLVVRD TDEAQLLGAL
ELDEEDLALC TFVCPSKYDF GQELRACLTI IEREG