| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2979 |
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| Symbol | |
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| ID | 4605226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3548616 |
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| End bp | 3549380 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782390 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_928851 |
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| Protein GI | 119776111 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTTA ACAAAGACAG TGTTCTCGGC ACCATGACCT TCACGGTCGT TCTGTGCCTG
GTGTGCTCCT TTATGATCAC CGGCACCGCC GATGTGCTCA AGGAGCGCAA GTTGGTGAAA
AAGCGCAACG AGCTGATGCA AAACGTGCTG ATTGCCGCCG ACATCAAGGA TGTCAGTGAT
GTCAAAGCCA CCTTCGAAGC GCGGGTTCGC CCGGTGATGG TAAACCTCGC CACAGGCGAG
CTGCATGAGC GCGACAACAT TCTCGACTAT GACGAGCGCA TGGCGGCCAT CAACCCGGAG
ACTTCCAGCA AGATTGCCAA AGACACGGCC CGCATCAAGA CCCGCGCCAA CGAAATCCGC
ATCTTCAAGG TGCTGGACGA CAAGGGCGAG CTGCAGGCAC TGGTGCTGCC GGTGTACGGC
AAGGGGCTGT GGTCGATTAT CTACGGCTTT GTGGGGGTGA AGGCCGACTT CAACACCATC
ACGGGCGCTG TGTTTTACGA GCACGGTGAA ACCCCGGGTA TCGGCGACTT TATCAATCAC
GACGACTGGC TCGCCAAGTG GCAGGGTAAG CAAATCTTCA ACGCCAAGGG CGATGTGGCC
TTCAAGATTG TGAAGGGCGA AGCCAAGGCC GGTGATTTGA GCGCCGTGGA TGGCGTGAGC
GGTGCCACCC GCACAGGTGC GGGCGTGGCC AAGGCGGTGC AGTTCTGGTT TGGCCCCGAA
GGCTTTGAAG CCGCGCTGGG CAAACTGAAA GCGGCGGGGG TGTGA
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| Protein sequence | MAFNKDSVLG TMTFTVVLCL VCSFMITGTA DVLKERKLVK KRNELMQNVL IAADIKDVSD
VKATFEARVR PVMVNLATGE LHERDNILDY DERMAAINPE TSSKIAKDTA RIKTRANEIR
IFKVLDDKGE LQALVLPVYG KGLWSIIYGF VGVKADFNTI TGAVFYEHGE TPGIGDFINH
DDWLAKWQGK QIFNAKGDVA FKIVKGEAKA GDLSAVDGVS GATRTGAGVA KAVQFWFGPE
GFEAALGKLK AAGV
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