| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2978 |
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| Symbol | |
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| ID | 4605225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3547988 |
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| End bp | 3548614 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782389 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_928850 |
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| Protein GI | 119776110 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG TATTATCCAA TCGTGAACTC CTGATGCGCC CGGTGTTTGC CAATAACCCG
GTGGCCATGC AGGTGCTGGG GGTCTGTTCG GCCCTGGCGG TGAGTAACTC CATGCAAACC
GCGCTGGTGA TGACACTGGC GGTGACCTTT GTGTTGGTGT GCTCCAACTT CTTTATCTCG
CTTATTCGCG CCTTTATCCC CAACAGCGTG CGCATCATCG CCCAGATGAC CATTATCGCC
TCGCTGGTGA TTGTGGTGGA TATGGTGCTT CAGGACGTGG CGCCGGACTT ATCCAAGCAG
CTGTCGGTGT TTGTGAGTCT GATTATCACC AACTGTATTG TGATGGGCCG CGCCGAAGCC
TTTGCCATGA AAGAGCCGCC ACACCTGTCG GTGATGGATG CCATCGGCAA TGCCGCCGGT
TACGGCTTTA TCCTGTTGAG CGTCGCCTTT GTGCGCGAGC TTTTGGGCTC GGGCACCCTG
TTTGGTCACA GCATTTTGAA GACCATTGAG CAGGGCGGCT GGTATTTGCC CAATGAGATG
TTCAAGCTGC CTCCCAGCGC CTTCTTCCTG ATTGGCGTGA TTATCTGGGT GGTTAACATA
GCTCAGCGCA AGCGCGCCAA GGCCTGA
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| Protein sequence | MSAVLSNREL LMRPVFANNP VAMQVLGVCS ALAVSNSMQT ALVMTLAVTF VLVCSNFFIS
LIRAFIPNSV RIIAQMTIIA SLVIVVDMVL QDVAPDLSKQ LSVFVSLIIT NCIVMGRAEA
FAMKEPPHLS VMDAIGNAAG YGFILLSVAF VRELLGSGTL FGHSILKTIE QGGWYLPNEM
FKLPPSAFFL IGVIIWVVNI AQRKRAKA
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