| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2974 |
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| Symbol | |
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| ID | 4605221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3544997 |
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| End bp | 3545524 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782385 |
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| Product | putative 2'-5' RNA ligase |
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| Protein accession | YP_928846 |
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| Protein GI | 119776106 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATG CACAAAGACT ATTTTTAGGA TTCGCACTTT CGGACCAAGA GGGCGAATCC
ATACTTAAGC TGCAAAAACG CCTCGGCGCC CCCGGAAAAA CCGTGGAAAA AGCCAACCTG
CATATGACCC TGGCCTTTTT GGGGCAAACC AGCCAACGTC AGTGCCAAAG ACTCGAAGCT
GCACTCGAAG GCATCACCAT GCCAAAGTTT GAGCAGCGGC TCGACTCCCT GGTTCACTGG
CGCGGCGCCG GTGTAGTCTG TTTGTGGGGC CAGGCCACAG ACTCAGGCCT GACAGACCTT
TACCACGGAT GTCAGTCCCT TTGCCAAAAC CTGGGGCTGC ATCAGAGTGA GCACGACTTT
AACCCCCATA TCACCCTGTT TCGCAAAGCC AAACAATTCT CCATCCCAGA ATGGCAACCG
GAGCCTGTGA TACTGCGGCC CGAGCGCCTT AATCTCTACC TTTCCAACAG CACCCCTGCC
GGTGTTCGTT ATGAAGTGCT GCAATCCTGG CCCCTCGGCA TTACCTGA
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| Protein sequence | MSDAQRLFLG FALSDQEGES ILKLQKRLGA PGKTVEKANL HMTLAFLGQT SQRQCQRLEA
ALEGITMPKF EQRLDSLVHW RGAGVVCLWG QATDSGLTDL YHGCQSLCQN LGLHQSEHDF
NPHITLFRKA KQFSIPEWQP EPVILRPERL NLYLSNSTPA GVRYEVLQSW PLGIT
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