Gene Sama_2969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2969 
Symbol 
ID4605216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3535165 
End bp3535839 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content54% 
IMG OID639782380 
Productnitroreductase 
Protein accessionYP_928841 
Protein GI119776101 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAAC TGCATCATCC CCTGAATGAC TTTATTGAAT ACCCACCCGA AGAAATGCGT 
CGCCGCGCAG AGGCCAATCT TATCGAGCTT CGCCGACGTC ACTCCATTCG CAAGTTTTCA
GACAAGCCGG TGGCCAGAGA AATCATTGAG CAATGCATAT TGGCAGCAGC TTCGGCGCCA
AGCGGTGCCA ATCATCAGCC CTGGCATTTT GTGGCAATTT CCAGTCCCGA TGTGAAGGCA
GCAATTCGTT GTGAAGCGGA GGCGCTGGAG CAAAGTTTTT ATCAGGGACG GGCAGGGGAA
GAGTGGCTGG ACGCTTTAAA GCCCCTGGGC ACCAACGCGA ATAAGGCCTA TTTGGAACGA
GCCCCCTGGT TGATTGCCGT GTTCAGCCAA AAGCGCGGCG GTGTGGATGA AGGCGATAAT
AAGACAAACT ACTATGTGCA TGAATCCGTT GGTATTGCTA CCGGCTTTTT GATTCAGGCA
CTGCACCATG CGGGCCTTGG CACCCTGACC CATACCCCAA AACCCATGAG CTTTTTGAGC
AAAATTTGCG GCCGTGACAA CGATGTGGAC CGGCCCTACA TGCTGATTGT GGCCGGGTAT
CCCGACCAGG ATGCCACTGT CCCCGACCAT GCCCTGAAAA AGAAATCCCT GGAGCAGGTG
GCTTCGTTTC TCTAG
 
Protein sequence
MTELHHPLND FIEYPPEEMR RRAEANLIEL RRRHSIRKFS DKPVAREIIE QCILAAASAP 
SGANHQPWHF VAISSPDVKA AIRCEAEALE QSFYQGRAGE EWLDALKPLG TNANKAYLER
APWLIAVFSQ KRGGVDEGDN KTNYYVHESV GIATGFLIQA LHHAGLGTLT HTPKPMSFLS
KICGRDNDVD RPYMLIVAGY PDQDATVPDH ALKKKSLEQV ASFL