Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2967 |
Symbol | |
ID | 4605214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3531903 |
End bp | 3533924 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782378 |
Product | hypothetical protein |
Protein accession | YP_928839 |
Protein GI | 119776099 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.386459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGAT GGATCCACTT CCTGCTCGTG ACAGGATTGT CTGCATTATT GGCCCTTACG CCAAGCCAAG CCAATACCAT TACCTCAGGT GAATACTCCC TCGAAGTCTC TCCCGCCCCG GATTGGGCCA CCCACGAGAC GCTTCAACCT CTGCCTGCCC AGCTCAATAA TGGCCCCAGC CACTTCCGGT TGGTATCGCG GCAAGTGTTG GTATCGCCGT TAACAGATCA CTATTTCCTC GAATTTGCTG CCTTGGCGGC CAATCATCAG GGAGTGAAGG AACTTTCCAA GCTTGAGTTG ACCTTCAACC CTGCATTCGA ATCCATGAAG CTGCACAGCC TGCAGGTGGA ACGTAACGGC GTTACCAGCG ACAGATTGGC GAAGGCGCGC ATCAATATTA TCAACCAGGA ACCCGAGCTG GTGAATGATT TGTTCCATGG GCTGGCGACT GCCGTGGTGG TGGTTCCCGA TCTGCGCGTG GGTGACACGC TGAGATACAG CTACTCGCTC GAGGGCAGAA ATCCAGTCTA CGGCAAGCAG TTTGGTGGCT ACTTTCAGAT GGGCTGGGAA GCAAGCGTCG ACCTGGTCAA TCTGGGCATC ATCAACGCCA GTGGTGTCCC CTTGCAGCTC AAACGCCACG AATTGCCCCC CGCCACCGAA TCCACAAGCA AATATGGCAT CGAGTATCAT TGGCGCCAAA CCAGGGTGCC CAGATACAGC TATGAAGAAG GTGCGCCGGC AGATGTCAAA TGGTCGCCCT ATGTCACCTT CAGCAGCAGC GACAATTGGG CCGCCATAGT CAATTGGGCC AGTGGTCTTT ACCGGTTTGA CAACAGCCCT TCCCCAGCGC TGACCAAGTA TGTAAACAGC GTGAGGGCAA TGGGAAATCA GGCCAAACAG ATTGAAGAAA TCGTGCGCTT TGTGCAGCAG GAAATCCGCT ATTTTGGCAT CGAAATGGGG CAAAGCAGCC ATGTACCCCA TACCCCGAAT CAGGTGTTCG AACGTCGGTA TGGCGACTGT AAAGACAAGG CCAACCTGAT GAATTTCCTG CTTTCTAACG TCGGCATCGA AAGTTACCCT GCACTGGTTA ACACCCGCAG TGGACGCTCA TTGCCCGAAC AGCAGCCATC CGGCGTGCTA TTTGACCATG TTATTAACCT GGTGGAGTTT AACGGTAAAC ACTATTGGAT TGATGGCACC AATCACGTGC AGGCACAGGG ACTGGAACAA CTGACACAAC CCGATTTCGG CTATGCATTG GTGCTGCGTC AGGGTGAGTC GGCACTGACG GCCATGCCAC AAAGTTTGCC CGCGGTAGAC AGCATCAATG TTGAACAGTC ACTTATCGCG TCTGGATATG ACAGCCCAGT GGACATGTAT GTGGTCAGCC GCTACCGCGG GAAAGAGGCC GATCGGATGC GCTATCAACT TCAGGGGGTC TCGACCTATG ATGTGGAGCA GCACTACCTC AACTACTATG CCAAGCTCTA TCCCGGTATC CGCCTACAAG AGCCTGTGTT GATACACGAC AGCAAAGAAG GTCGAAACGA GATTCTACTC CGGGAGCAAT ATCAAATAGA TAACTTCTGG AACGTCGAAG GCAAAAATGC CAATTTCAGT ATGCTGGCCT TCAAGCTTAC TGATTTCATT CAACTGCCAT CCGTGATCCA GCGTACCCAG CCAATGGCCA TATCCGGGCC TGTGACTGTT AATCACACCA TTCGGGTGAG CTTACCCCAG CCGGTTCAGG TGCACGTCAA CGGGGACGAC CTGATAATTG ACACCCCCAG TCTCGCCTAT CGTTCCAGTG AGCTGGGTCG TCCGGGCACT CTTATCCGTC AACATTCACT GGTCCTGAAG CAGGACAGGA TCCCCGCCAC CGAGAGCGCC GAGTACTTTG ACGCACTGAA AAAAATCGAT CGGGATATCT ACTACACCGG CACCGCTGAG GGAGACTTTA CCCAACCCAG CAACCCCGGT ATCGACTATC TGGAACAACA CCTGAATACA GGTAATCGCT GA
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Protein sequence | MNRWIHFLLV TGLSALLALT PSQANTITSG EYSLEVSPAP DWATHETLQP LPAQLNNGPS HFRLVSRQVL VSPLTDHYFL EFAALAANHQ GVKELSKLEL TFNPAFESMK LHSLQVERNG VTSDRLAKAR INIINQEPEL VNDLFHGLAT AVVVVPDLRV GDTLRYSYSL EGRNPVYGKQ FGGYFQMGWE ASVDLVNLGI INASGVPLQL KRHELPPATE STSKYGIEYH WRQTRVPRYS YEEGAPADVK WSPYVTFSSS DNWAAIVNWA SGLYRFDNSP SPALTKYVNS VRAMGNQAKQ IEEIVRFVQQ EIRYFGIEMG QSSHVPHTPN QVFERRYGDC KDKANLMNFL LSNVGIESYP ALVNTRSGRS LPEQQPSGVL FDHVINLVEF NGKHYWIDGT NHVQAQGLEQ LTQPDFGYAL VLRQGESALT AMPQSLPAVD SINVEQSLIA SGYDSPVDMY VVSRYRGKEA DRMRYQLQGV STYDVEQHYL NYYAKLYPGI RLQEPVLIHD SKEGRNEILL REQYQIDNFW NVEGKNANFS MLAFKLTDFI QLPSVIQRTQ PMAISGPVTV NHTIRVSLPQ PVQVHVNGDD LIIDTPSLAY RSSELGRPGT LIRQHSLVLK QDRIPATESA EYFDALKKID RDIYYTGTAE GDFTQPSNPG IDYLEQHLNT GNR
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