Gene Sama_2954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2954 
Symbol 
ID4605201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3516822 
End bp3517370 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID639782365 
Producthypothetical protein 
Protein accessionYP_928826 
Protein GI119776086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0995258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA ATAAGATCAC CCTGACACTG GCACTGCTTG CCACCACCCA ACTCGCCGGC 
TGCATGGGCC AAATGGGCCT CAGCGGCATG CTGACCCAGG GCAACCTGTC GGCGGTGGAT
AACCGTTATG GCCGCGCCGG CCTGTATATG CTGCTGGCGC CTGTGTATGG TCTCACCGCC
ACAGCCGACC TCTTTATCTT CAACAGCATC GAATTCTGGA CCGGCAAAAA CCCCATAACC
GGCAAGTCAC CGGCCTTGGC AGACACGCCC GCCAAGACCA TCATCAAGGT CAACGACAAG
CTGGATAAGG AGCTGACAGA CGCGCCGCTC AAGGGCACGC TGGGGGCCAA CAACAGTCAG
CAGATTGAAG ATGCGCACTT TGTTGCCATC GATGACAACA CCCTGACCAT GTTGGTGCGT
TTCAGCGATG GCAGCGAGCA AACCATGACA GGCAAGCGCA GCGGCGACGG GGTGGACTTT
TATGTGGACG GGGCCTTTGT CACCCAGGTT CAACTGAGTG AGCTCAGCAC CTACGCAGCC
AGCCGATGA
 
Protein sequence
MKLNKITLTL ALLATTQLAG CMGQMGLSGM LTQGNLSAVD NRYGRAGLYM LLAPVYGLTA 
TADLFIFNSI EFWTGKNPIT GKSPALADTP AKTIIKVNDK LDKELTDAPL KGTLGANNSQ
QIEDAHFVAI DDNTLTMLVR FSDGSEQTMT GKRSGDGVDF YVDGAFVTQV QLSELSTYAA
SR