Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2950 |
Symbol | |
ID | 4605197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3507032 |
End bp | 3507997 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782361 |
Product | hypothetical protein |
Protein accession | YP_928822 |
Protein GI | 119776082 |
COG category | [R] General function prediction only |
COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.128339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTA CCGTCTCACA GGCCGCCTGG GCGCTGGACA GCGAAGGCCC GGCATTGACC CTGAGCTTAC TCAATCACCT CGGGCTGGTG TCTGTCACCG GCGAGCAGGG CAACAGCTTT ATCCACGGCC AGGTCACCGC CGATATCAGC GCACTGGAAC CCGGCCAATG GCGCTGGGGT GCCCACTGCG ATCCCAAGGG CCGTATGCTG GCGACCTTCC GTACCTTTAA ACTGGGTGAC GCCCTGATGA TGCTGGAGCC GCGCAGCGCG CTTGAAGTCT CACTGGCACA GCTGAAAAAG TATGCCGTAT TCAGCAAGGC GGAACTTGTG GATATGAGTA GCGAACTGAC CCTGCTGGGT GTCTCAGGTC CAGAGGCCGC CGGGTTTGTT GCCCGGCACT TTGGCACAGC CGAGGCAGAT GTTTTCAGCA CTGAGCAAGG CACAGTGCTC AAAGACGGTG AGCGTTTTAT CCTGATCCTG GACAAGGCCA ATGCCTGTGC CCTGATTGAG AAAAGTGGCC AGCCTCTCTA TGGCGCTGGT GTGTGGCAAG CATTGGAAAT CCGTGCCGGC TACCCCAATA TCGCGGCCGG TCATGCCAGT GAGTACATTC CGCAGATGTG TAATCTGCAG GCCCTCGGCG GAATAAGCTT CAACAAGGGC TGCTACATGG GTCAGGAAAC CGTGGCCCGC ACAAAATACC GTGGCGGCAA CAAACGCGCG CTCTACATCC TCTTTGGTGA AAGCCAGACA CCGGTGCGTC TCGAAAGTAC GCTGGAAATC GCCGTGGAAG GCGGGTATCG CAAGGCGGGC AACATCATTG AGGTGGTTAG CCGTGGCAAT AAGGTTCTGA TGACCGCTGT CCTCGCCAAT GACACAGCGC CCGATGCGGT GCTGCGTCTC GCGGATGACC ACGAAGCCAG TTTTACCCTG CTGCCTCTGC CCTACTCGCT GGAAGAAGAA GCGTAA
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Protein sequence | MTFTVSQAAW ALDSEGPALT LSLLNHLGLV SVTGEQGNSF IHGQVTADIS ALEPGQWRWG AHCDPKGRML ATFRTFKLGD ALMMLEPRSA LEVSLAQLKK YAVFSKAELV DMSSELTLLG VSGPEAAGFV ARHFGTAEAD VFSTEQGTVL KDGERFILIL DKANACALIE KSGQPLYGAG VWQALEIRAG YPNIAAGHAS EYIPQMCNLQ ALGGISFNKG CYMGQETVAR TKYRGGNKRA LYILFGESQT PVRLESTLEI AVEGGYRKAG NIIEVVSRGN KVLMTAVLAN DTAPDAVLRL ADDHEASFTL LPLPYSLEEE A
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