| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2949 |
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| Symbol | |
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| ID | 4605196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3505670 |
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| End bp | 3506899 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782360 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_928821 |
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| Protein GI | 119776081 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0661505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC ATTCGCTGGA CAAGGATAAG ATCAAGTTCC TGCTGCTCGA AGGCGTCCAC
CAATCTGCGG TAGATGTACT TGAGCGGGCG GGCTACACCA ATATCGAATA TCACAAGGCG
TCCCTCGCCG ATGAGGCGCT GGTCGCGTCC ATCAAAGATG CCCACTTCGT CGGCATTCGC
TCCCGCACTC AACTGAGTGC CGAGGTGCTG AGCAAGGCCG AAAAACTGGT TGGAATTGGT
TGCTTCTGTA TTGGTACCAA CCAGGTTGAC CTCAAGTCTG CCGAGCTGGC CGGTATCCCG
GTATTTAACG CGCCCTTCTC CAATACCCGC TCTGTGGCTG AGCTGGTATT GGGCGAAATC
ATCATGCTGA TGCGCGGCAT CCCCCAACGC AACGCCTTGT GCCACCGTGG CGGCTGGCTC
AAGAGTGCCA ATGGCAGCGT GGAAGTGCGC GGCAAAACCC TGGGCGTGAT TGGCTATGGC
CACATAGGTA CCCAGCTTGG CATTCTGGCC GAAACCCTGG GTATGCGGGT GAAGTTTTTC
GATATCGAAG ACAAGCTGCC ACTGGGCAAC GCTCAGCAGG TGCATTCCTT TGAAGAATTG
CTCGCCAACG CCGATGTGGT GAGCCTGCAT GTGCCAGAAA CCCCGCAGAC CAAAAACATG
ATTGGCCATA CTGAACTGGC CACCATGAAA AAGGGCAGTT TCCTGATTAA CGCGTCCCGC
GGCACAGTGG TAGACATCGA TGCTCTGTCA GCCGCGCTCA AAGAAGAGCA CATTGCCGGC
GCTGCCATCG ACGTGTTCCC GGTTGAGCCC AAGTCAAACG ATGATGTGTT CCAAAGTCCT
CTGCGTGGTC TGGACAATGT CATCCTGACC CCACATGTGG GTGGTTCTAC CGAAGAGGCC
CAGGAAAACA TTGGTATCGA AGTGGCTGGC AAGCTCGCCA AGTACTCAGA CAACGGCTCC
ACCGTGTCTG CGGTGAACTT CCCCGAGGTA TCCCTGCCGA TGCACAAGGG CACCTCACGT
TTGCTGCACA TTCACAAAAA CCGCCCCGGT ATTCTTATCA AGATTAACCA GGCGTTTTCT
GAAAAAGGTA TCAACATTTC CGCCCAGTAC CTGCAAACCA CCGCAGATAT AGGTTACGTG
GTGATGGAAG TGGACACCCA CCAGGCCGAG GAAGCACTCG AGCAGCTGCG TGGCATCGAA
GGCACCATCA GAACCCGTTT GCTGCACTGA
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| Protein sequence | MAKHSLDKDK IKFLLLEGVH QSAVDVLERA GYTNIEYHKA SLADEALVAS IKDAHFVGIR
SRTQLSAEVL SKAEKLVGIG CFCIGTNQVD LKSAELAGIP VFNAPFSNTR SVAELVLGEI
IMLMRGIPQR NALCHRGGWL KSANGSVEVR GKTLGVIGYG HIGTQLGILA ETLGMRVKFF
DIEDKLPLGN AQQVHSFEEL LANADVVSLH VPETPQTKNM IGHTELATMK KGSFLINASR
GTVVDIDALS AALKEEHIAG AAIDVFPVEP KSNDDVFQSP LRGLDNVILT PHVGGSTEEA
QENIGIEVAG KLAKYSDNGS TVSAVNFPEV SLPMHKGTSR LLHIHKNRPG ILIKINQAFS
EKGINISAQY LQTTADIGYV VMEVDTHQAE EALEQLRGIE GTIRTRLLH
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