| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2945 |
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| Symbol | |
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| ID | 4605192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3499049 |
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| End bp | 3501646 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782356 |
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| Product | extracellular nuclease |
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| Protein accession | YP_928817 |
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| Protein GI | 119776077 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.172583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATG TTAAAAAGCT GACAGCCATT GCCGTGGCTG TATCGGCGGC AATGCCATTG
CTGGCAAATG CTGATGTGAT GATTACTGAA TATGTAGAAG GCAGTTCCAA TAATAAAGCC
ATTGAGCTTT ATAACAGCGG TGATGCGGCC GTTGATCTGA CTGGTTACAC TCTGGCGCGC
TATAAAGATG GCGCTACCAC ACCCAGCAAC ATGGTGGCCC TCGATGGTCA AAGTCTGGCC
GCCAAAGGCA TCAAGGTTAT CACGCACCCA AGTGCGGTTA TTACCCTGCC AGCGGGCACC
GACACCATGA CGGGCGATCT CTACTTTAAC GGTACCGATG CGGTGGCGCT GATGAAAGAC
GGCGCCATTG TAGATGTGGT GGGAGCCATT CCCACCCCCA AAGATTGGGG CCTTAACGTC
ACTATCGCCC GTAAGACCAG CGCACTGGCT GCGGCGACTG TGTATAACGA AGCCGACTGG
GAAACCTCGG CCATCGACAA CTTTTCAGGC CTTGGCAGCC TCGAAGGTAC AACCGCACCC
GAAGTGCCAG CCTTCAGCTG CGCCGGTGAT ACGCTTATCC CGATTTATGA CATTCAGGGC
AGCGGCGATA AGAGCCCACT GGTGCCCGAA GGCAAGTTTG AATCCGACAC GGAAGTGACC
CTGCGTGGCG TGGTTTCAGC CCGAGGTGAG AGTCTATTTA AAGGTTTTTA CCTGCAGGAT
GTGCAGGGTG ATAACTCCCC TCTGACCTCC GACGGCATTT TTGTGTTCCT CGGCGAAGCA
GCCCCCGAAG CGATTCAGCC CGGGGTGGAA GTCTGTGTCC AGGGTAAGGT GAAGGAATAC
TTCGGCCTGA CCCAAATCGA CATCAAGGCC GACAAAAAGT TTGAAGTGGG TGCCAAGGGT
GACGTCCCGG CCGCCGCAGC ATTTGCCGTA ACTGAAGGTG AATCCCTGGA GCAGGCGCTG
GAGCGCTTCG AAGGTATGAA AGTAGTACTG GATGCCGGTA GCGAGATGAA AGTCAGCCGT
ACTTTCAGCT ACGACTATGC CGGGCGTCGC AACAACCTTA TGCTGTCCCA CAAGGCGCCG
CTGATGAAAC CTACTCAGGT GTATCCGGCG CTGAGTGAAG AAGCCGTTGC CCTTGAGAAG
CAAAACCGTG GCAACGAGCT GTTTGTGGAG TCTGACTTCA AGGCCGCCGA CGGCGTAGTG
CCATTCCTGC CTGACTTTAA CGCCGAAACC GGTTATATCC GCGTGGGCGA TGAGCTCAAG
GGCCTCGAAG GCATGGTGAG CTACAGCTAC AACGAATACC GCCTGGTAAC CACCAACACC
ATTACTCCGG CCGACATCGT CCGTGGTATG GATCGCACCG ACGCCCCGGT TGTAGCCGAG
AAAGGCGATA TCCGCGTGGC CAGCTTTAAC GTACTCAACT TCTTCAACGA TGTGGTAGGC
GGCGATGCCA ACCCAACCGG CTCCAATCGT GGCGCCCTGA CCGAAGAAGA AATGCTGCTG
CAGCGCACCA AGATTGTGAA TGCCATCACC GCCATGAACG CCGACATTGT TGGCCTGATG
GAAATCGCCA ACAACGGCTT TGGTGAGAAG AGTGCCATTC AGAACCTGCT GGATGCCCTG
AACGCCGAGC AATCGGCCGA CAACGCCTAC AGCTTTGTGG AAATTGCCGA GGCCGACAAG
ACTGACGGCA AATATTTCGG TAATGATGCC ATCACAGTGG GCATGCTGTA TCGCGCCGCC
AAGGTAAGTC CTGAAGGTAC GGCCTTTGTG ATTGAAACCC CTGAGCAGCA TGCGCCGGAA
GGCGTAGCCA GCCGCGACAA CAAGGGCACA GTTGAAACCA GCCCGGCGCA GGACAAGTAT
CAGCGTCACA GCCTGGGTCA AACCTTCAAG GTAAAAGATG AAAACCTGAC AGTGGTGGTA
AACCACCTCA AGTCTAAAGG TTCAGGCTGC CTGGAAGATT GGATCAATTT CGATGAAAGC
CGCGATCCGG CCGATCTGCA GGGCAAGTGT AATGCGTTCC GCGTATCGGC TGCCAAGGTG
ATTGGTGAAG CCGTGAAAGA CATCGAAGGC GATGTGTTGG TCATTGGCGA CTTGAACGCC
TACGGTATGG AAGATCCGGT GCGTGTGCTG ACCGATTACG ATGCCACCAC CTCCAACCGT
AAAGTGAAAA CCGCTTCTTA CACCACACTC GCTGGTCAGA GTTACGAGCA ACAGGGCAGC
GTGATTGAGA AGGGCTATGG CCTGATTAAC CTGAATACCC AGGTACATGG CGCCGATACC
TACTCTTACA GCTACAACGG TGAGTTGGGT AACCTCGACC ATGCGTTGGG TAACGAGAGT
CTGGCCAAGC GGGTGGTGGA TATTGAAGAC TGGCACATCA ACTCGGTGGA ATCCAACCTG
TTCGAATACG GCAAGAAGTT CACCGGTAGC CTGGAGAAAT CCGAAAATGC CTTTTCTGCA
TCAGACCATG ACCCTGTGAT CGTGGCCCTG AGCTATCCCG ATAAAGTGGA AGAGAAAAAG
GATGATGGTG GTGCCATGGG CGGACTGCTG CTGGCATTGG CAACCTTGAT TGGCCTTGGT
CGTCGCCGCA TTCATTAA
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| Protein sequence | MENVKKLTAI AVAVSAAMPL LANADVMITE YVEGSSNNKA IELYNSGDAA VDLTGYTLAR
YKDGATTPSN MVALDGQSLA AKGIKVITHP SAVITLPAGT DTMTGDLYFN GTDAVALMKD
GAIVDVVGAI PTPKDWGLNV TIARKTSALA AATVYNEADW ETSAIDNFSG LGSLEGTTAP
EVPAFSCAGD TLIPIYDIQG SGDKSPLVPE GKFESDTEVT LRGVVSARGE SLFKGFYLQD
VQGDNSPLTS DGIFVFLGEA APEAIQPGVE VCVQGKVKEY FGLTQIDIKA DKKFEVGAKG
DVPAAAAFAV TEGESLEQAL ERFEGMKVVL DAGSEMKVSR TFSYDYAGRR NNLMLSHKAP
LMKPTQVYPA LSEEAVALEK QNRGNELFVE SDFKAADGVV PFLPDFNAET GYIRVGDELK
GLEGMVSYSY NEYRLVTTNT ITPADIVRGM DRTDAPVVAE KGDIRVASFN VLNFFNDVVG
GDANPTGSNR GALTEEEMLL QRTKIVNAIT AMNADIVGLM EIANNGFGEK SAIQNLLDAL
NAEQSADNAY SFVEIAEADK TDGKYFGNDA ITVGMLYRAA KVSPEGTAFV IETPEQHAPE
GVASRDNKGT VETSPAQDKY QRHSLGQTFK VKDENLTVVV NHLKSKGSGC LEDWINFDES
RDPADLQGKC NAFRVSAAKV IGEAVKDIEG DVLVIGDLNA YGMEDPVRVL TDYDATTSNR
KVKTASYTTL AGQSYEQQGS VIEKGYGLIN LNTQVHGADT YSYSYNGELG NLDHALGNES
LAKRVVDIED WHINSVESNL FEYGKKFTGS LEKSENAFSA SDHDPVIVAL SYPDKVEEKK
DDGGAMGGLL LALATLIGLG RRRIH
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