| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2935 |
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| Symbol | |
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| ID | 4605182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3487928 |
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| End bp | 3489265 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782346 |
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| Product | Na+/H+ antiporter family protein |
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| Protein accession | YP_928807 |
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| Protein GI | 119776067 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0881293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCAAT CCCCAGACAC TCAGGGCAAC GCAAGTGCTG CTTCATTCGT TGCCCTGCTG
CCACTGTTTC TGTTTTTGGC GCTTTTCATT GGCGCAGGTG TGTACTTCAC CAGTCAGGGC
GTGGACTTTG CCTTCTATCA GTTGCCCAGT GTAGTGGCTA TTCTGCCTGC CATAGTGCTG
GCGCTGCTGC TGTCAAAGCA AAAGCTAAAT CAGGCCATAG ATACTTTTAT CGGCGGTATT
GGCCACAGCA ATATCATTGC CATGTGCTTG ATTTACTTGC TGGCGGGCGC CTTCGCCTCG
GTAGCCAAGG CCACCGGAGG CGTGGATGCC ACCGTCGCCC TTGGCCTGTC ACTTATTCCC
TCTGATCTGC TGCTGCCGGG CTTTTTTGTG ATTGCCGCCT TTATTGCCAC TGCCATGGGT
ACTTCCATGG GCACCATAGC TGCGGTTGCG CCCATTGCTT TGGGCGTGTC CCAGGAAGCC
GATATTTCGC TGCCGCTGAT GGCAGGTGCC ATCATTTCCG GCGCCCTATT TGGTGATAAC
CTGTCCATCA TTTCCGACAC CACCATTGCT GCAACCCGCA CCCAGGGCTG CAACATGAAA
GACAAATTCC GTGAGAACCT GATTTTCGCA TTGCCAGCGT CACTCATCAC CCTGCTGGCC
TTTACCCTGG CGGGTCAGGG CGAAGCCAAT GTGGCGCCTC AGTCGGTGGA CTTTGTTAAG
GTGCTGCCTT ATCTGTGCAT TCTGTTTTTG GCGGTCGCCG GGCTGAACGT GTTTGTGGTG
CTGGGTATTG GTATTCTGCT GGCCGGTTTG GTGGGCATGT TCACCACCGA CTACAGCTGG
GTCAGCTTCA GCAAAGATAT TTACGCCGGT TTTGGCAACA TGCAGGAAAT CTTTATCCTG
TCCATGTTAG TGGGTGGTCT GGCTGCGCTG ATGCAGCAGC AGGGTGGCCT TGCCTTTGTC
AGCCGCTTTA TCGAAGGACT GATCGCCCGT TTTTCCAAGG CAAAGGGCGA AGCGTCCTGC
CGCGCCGCTG AATTGGGTAT GGCAGGCATA GTGTCCCTGA CCAACGCCTG TGTGGCCAAC
AACACAGTAT CCATTGTGAT AAGCGGTGAT ATCGCCCGGG ATCTCGCCCA GAAGCATGGC
GTCAGCGCCA AGCGCAGCGC CAGCGTGCTC GATATATTTT CCTGTATTGT TCAAGGACTT
ATACCGTATG GCGCCCAGGC ACTTTTGATT GGGGCAACCT TTGCCATTAC CCCCCTGGAG
GCAGTATCCT ATGCATGGTA CTGCATGATA TTGGCGCTGG TAGCCGTTCT GATCGTGACA
TTCAGACAAC GTCACTGA
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| Protein sequence | MNQSPDTQGN ASAASFVALL PLFLFLALFI GAGVYFTSQG VDFAFYQLPS VVAILPAIVL
ALLLSKQKLN QAIDTFIGGI GHSNIIAMCL IYLLAGAFAS VAKATGGVDA TVALGLSLIP
SDLLLPGFFV IAAFIATAMG TSMGTIAAVA PIALGVSQEA DISLPLMAGA IISGALFGDN
LSIISDTTIA ATRTQGCNMK DKFRENLIFA LPASLITLLA FTLAGQGEAN VAPQSVDFVK
VLPYLCILFL AVAGLNVFVV LGIGILLAGL VGMFTTDYSW VSFSKDIYAG FGNMQEIFIL
SMLVGGLAAL MQQQGGLAFV SRFIEGLIAR FSKAKGEASC RAAELGMAGI VSLTNACVAN
NTVSIVISGD IARDLAQKHG VSAKRSASVL DIFSCIVQGL IPYGAQALLI GATFAITPLE
AVSYAWYCMI LALVAVLIVT FRQRH
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