| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2921 |
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| Symbol | |
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| ID | 4605168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3473330 |
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| End bp | 3474685 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639782332 |
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| Product | beta-lactamase class C-like protein |
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| Protein accession | YP_928793 |
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| Protein GI | 119776053 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.154271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGAG TTTTACTTGC CGTACTATGC AGTGCAGCGG TGTTGATGTC TTGTGGCAAA
AAAGACACAG ATACCACGCA GATTGACGAT ATTCAGTCAA GGCAGGAGAG GCTGCACAGG
GCATTTGATG ACATCCGCTC GCAATCTGAC TTTATGGGCA GTGTTGTGTT GATGCATTCA
GGTAAAGTGA TTTTTTCAGA TAGCTCGGGC TTCGATGATA TAAGCAAGAA TGAAAAATCG
ACCACACATT CAGCTTACTT GATTGGCTCA GTGTCAAAAA CCTACACAGC CGCCCTTGTG
CTAAAGGCGG TTGACGAACA AAAGCTGACG CTGGAACAAA CACTCGAGGC ATTTTTTCCG
ACCCTTGAAA ATGGACACCT AATCAGCATC AAAAATCTGC TTCAGCACAC CAGTGGCATT
GGCAATTACA CCAAAAAAGG AAAAGGATTT TTTGACTATC GGACAGAGAA TCAAAGCAGT
GAGAGTATGC TCAACCGAAT TTTGGCGCTG GGCAGCGATT TTGAACCAGG CACCAAAGCG
GAGTACAGCA ACTCCAACTA TTATCTGCTG GCTCTCATCC TGGAAAAGGT ATACCAAAAG
AGCTTTGGTG AGATACTCAG TGAAAAGATA ACAACGCCAT TAAACCTGAC TCAAACGGTA
CATGTGCGCG ATACCCATCA AACTCAACAT TCGTACTCCT TTGATAATGG GCAATGGTCA
ATGTTTCCTG CATCCAATAT GTCTGTTGGG CTGGGGGCGG GTTCCATTAA GGCAACACCC
ACAGAGGTTG CGATTTTTTA TAATGCCTTG TTTAACGGTG AGATTATCCC TTTGCCATTG
GTTGATACCA TGAAGCAGAC CAAAAATGGT TTTGGTTTGG GTATTAAACC CATTGATTTT
TTTGACAAGC AAGGATTTGG GCACGGTGGG ACTTTTGATG CATATAACGC GATGGCGGCC
TATTTCCCTC AGGAAAAGAT GACGCTGGTT TTAGCATCCA ATGGATCAAA TGATAACTTT
CATGACACCT ATCAACAGAT GCTGAAAAGC TACTTTAATC AAACCCTGAC TGATCTGCCA
GTCGCGGCAG AAGAGCTGGC GCGCTATGTG GGTCAGTATC AGGCCATCCC TGACGATCCC
TATGGGGTGA CCCTGATTAA CCTCGATGGC AAGCTCGCCA ATCAATTTCC TGATGGTTAT
ACCCAGGCGC TGCGATATGA AGGCGATGGC CGCTTTGTTT ATGACCAGGT CGGCGCCGAA
CCTGTTTATT TTATTATTTC AGACAATGGC GACAGGCTGT CGACCAGGTT AGGGGAAAAG
GGCGAGGAAG AAGTGAAAAT GAAGGTCGTT CATTAA
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| Protein sequence | MTRVLLAVLC SAAVLMSCGK KDTDTTQIDD IQSRQERLHR AFDDIRSQSD FMGSVVLMHS
GKVIFSDSSG FDDISKNEKS TTHSAYLIGS VSKTYTAALV LKAVDEQKLT LEQTLEAFFP
TLENGHLISI KNLLQHTSGI GNYTKKGKGF FDYRTENQSS ESMLNRILAL GSDFEPGTKA
EYSNSNYYLL ALILEKVYQK SFGEILSEKI TTPLNLTQTV HVRDTHQTQH SYSFDNGQWS
MFPASNMSVG LGAGSIKATP TEVAIFYNAL FNGEIIPLPL VDTMKQTKNG FGLGIKPIDF
FDKQGFGHGG TFDAYNAMAA YFPQEKMTLV LASNGSNDNF HDTYQQMLKS YFNQTLTDLP
VAAEELARYV GQYQAIPDDP YGVTLINLDG KLANQFPDGY TQALRYEGDG RFVYDQVGAE
PVYFIISDNG DRLSTRLGEK GEEEVKMKVV H
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