| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2908 |
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| Symbol | |
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| ID | 4605155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3456847 |
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| End bp | 3458628 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782319 |
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| Product | ABC transporter, ATP-binding/permease protein, putative |
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| Protein accession | YP_928780 |
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| Protein GI | 119776040 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.703712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGACA CCTTGGCCAC CAACAACCAG GCAACGACGG CCTCGCAGGG CAATGTCGTT
GCCTGGTTGG GCAGTTTTTT ACGCCCCTAT AAACTCAGGG TAATCACAGC GCTCATTTGT
TTGTTGATTG GCTCGCTGGC CTGGCTTGCG CTGGGGCAGG GGGTAAAGCT GATTGTCGAC
GAAGGCTTTG TGGCCGGAGA CGCTGCGCGC CTCAATCAAC TGGTGTGGCT GTTGGTGGGC
ATAGCTGCCA TCAGCTCCAG TGCCGTGTTT TGCCGCTTTT ATTTGATGAG CTGGCTTGGA
GAGCGGGTAA GCAATGATAT TCGCGCCCGG GTGTACGATA ACCTCCTGAC CCTGCCGCCC
GCCTTTTATG CGAAGCTTAG AACCGGTGAG GTGATATCCC GCTTCACCGC CGACTCCACC
TTGCTGCAAA CCGTGATTGG CTCGAGTTTC TCCATGGCGC TGCGCTCCTT TGTGTCTGTG
CTTGGTGGCA TCGCCATGAT GGCCATCACC AGCGTAAAAC TCACGGCGTT GGTGCTGGTG
GCCGTGCCCG CCGTGCTGGT GCCCATTCTG ATTTTTGGCC GCAAGGTGCG CACCCTTTCC
CGCGACAGCC AGGACAGGGT GGCCGACCTT GGTGCCTACA TTGATGAAAG CCTGCACGAA
ATTCATACGG TGCAGTCCTA CACCCACGAA CAGGTCGACA GGGACAAGTT TGCTGGTTTG
CTCGGCAAGG TGCTGGGCAG CGCCGGACGC CGTATTCAGT TTCGGGCACT CTTGATAGCG
GGGGTGATGT TTTTAACCAT AGCCGCCATC GCCCTGATGA TATGGGTAGG CGCGCGGGAT
GTGATGATCG GCGCCATCAG TGCCGGTGAA CTCTCGGCGT TTTTGTTCTA TGCCCTGCTG
GTGGCTGGGG CCACAGCCAC CATCAGCGAA GTGATAGGGG ATGTGCAGCG CGCCAGCGGC
GCCGCTGAAC GCTTAAAGGA GCTGAGCGAA GCCGTGAGTG AAGTGCCTCA GGCTCGACAT
CCGGTGGCGC TGCCCGCCAA ACTCAGCGGC GATATTCGTA TCGAGGGACT CAGTTTCTGC
TATCCCGGTA CCGACGTCCG CGCGCTGGAT GAGATATCAG TGCATATTCG CCCCGGTGAG
AAAGTGGCCC TGGTGGGCGA AAGTGGCGCG GGCAAAAGTA CCCTGTTTCA GCTTCTGGGC
CGTTTTTATG CGCCGGATAG CGGTACCATC TATTTGGATG ATACGGATAT CGCTAACGCC
GACCTGCAAG CGCTCAGACG TGCCTTTGCC CTGGTGCCCC AGGAGTCGGT GATTTTTGCC
GATTCGGTGC TGGAAAACGT TCGCTACGGT AAGGTGGATG CCACTCTCGA TGAGGTGAAG
GCTGCCTGTG TGGCGGCCCG TGCCCACGAC TTTATCGAGG CCATGCCCGA GGGCTACCAC
AGTTATTTGG GGGAGCGCGG GGTGAAACTC TCCGGTGGCC AAAAGCAGCG CATCGCCATC
GCCCGCGCCA TACTCGCAAG CCGGCCCGTG CTCTTGCTCG ACGAAGCCAC CAGCGCCCTG
GATGCGGTGA GCGAGCGCTA TGTAAAAGAA GCGCTGGATA CCCTCATCTG TGGCCGCACC
AGCCTTATCA TCGCCCATCG CCTGGCAACC GTTATCAATG CCGACCGGAT CCTGGTGATG
GACAAGGGCA AAATCATTGC TCAAGGCAGC CACACAGAGC TGCTGGAATC CAGCCAGCAA
TACCGGGAAT TCGCCAGTTT GCAGCTGTTA ACGGAAGCGT GA
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| Protein sequence | MPDTLATNNQ ATTASQGNVV AWLGSFLRPY KLRVITALIC LLIGSLAWLA LGQGVKLIVD
EGFVAGDAAR LNQLVWLLVG IAAISSSAVF CRFYLMSWLG ERVSNDIRAR VYDNLLTLPP
AFYAKLRTGE VISRFTADST LLQTVIGSSF SMALRSFVSV LGGIAMMAIT SVKLTALVLV
AVPAVLVPIL IFGRKVRTLS RDSQDRVADL GAYIDESLHE IHTVQSYTHE QVDRDKFAGL
LGKVLGSAGR RIQFRALLIA GVMFLTIAAI ALMIWVGARD VMIGAISAGE LSAFLFYALL
VAGATATISE VIGDVQRASG AAERLKELSE AVSEVPQARH PVALPAKLSG DIRIEGLSFC
YPGTDVRALD EISVHIRPGE KVALVGESGA GKSTLFQLLG RFYAPDSGTI YLDDTDIANA
DLQALRRAFA LVPQESVIFA DSVLENVRYG KVDATLDEVK AACVAARAHD FIEAMPEGYH
SYLGERGVKL SGGQKQRIAI ARAILASRPV LLLDEATSAL DAVSERYVKE ALDTLICGRT
SLIIAHRLAT VINADRILVM DKGKIIAQGS HTELLESSQQ YREFASLQLL TEA
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