Gene Sama_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2907 
Symbol 
ID4605154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3455692 
End bp3456714 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID639782318 
Producthypothetical protein 
Protein accessionYP_928779 
Protein GI119776039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.621044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAATTC AGGCTAACCA TATGAACGGC CGGGTGTACG ATTATAACCT GGGCCGCTTC 
ATGAGCGTGG ATCCGCTGAT CCAGAGTCCC ACCTCGACCC AGAGTGTGAA CCCCTATTCG
TACATAATGA ACAACCCGCT GGCGGGGACG GATCCGACTG GGTATGCCTG TGAGGCAGCA
ACTGGTTCGC ATATTTGTAA ATCGGAAGTT AAGGCTACAG TGACAAAAGA AGGTACTACG
GCAAAAGTGC ACTTAACTGG CGGAACAGCG AAACAGCAAC GAGCCGTTGC CAATACCATT
GTCAATGGCG CTAAAACTGC ACAGGCAACC GGAAGTTCGC TGGCAAGTGG CATTCTCTCT
GAAGTTGGTA GTATGCTGTG GAATACAAAG CAGACCATGG GAAGCACAAC TAATAGTAAT
AGCGATAATA CTGCCGGAGA AGTAGCCACC GCAGCTGGTG CAGCCTCAGT ATCGCTTTCT
GTGCTAGAGC ATACTACAGA TGGAAAAGCA CTAGTGCCCC CAATAGGAGA TTATGATTCA
ACCGGTCAAT CACGGGTAAT GGGAAAGCTT GAAAAAGTTA AACCTGGAAA AATCAATCAA
ATACCATTAA AAGAAATAAC AAAATATGCT AGTCGATTAG GTGGTGCGCT TGGTGCTGTG
GCTGTTATGG CTTCCTATAA AGCTAATATA GCTGCTTTAG AAAAAGGAGA TATTAGTGAC
TCAGAACTGA AAGGTAAGCT TTTTGCCGAT GCAGTAGTTG CCCTAATTGC TTTTCGAGGG
GGCAAGGGAG GGGCTATTGT CGGTGGAGCT TATTTTGTAG CTGACTACGT TTTTTCAAAA
GACGATGTGA ATGGTTGGAT CATGATTAAA AGAGAGAGCG TAAGTGCAAT GGAAAATACT
CAATCATCTA TATCCGATAG CACTCGTGAA TTGAAAGCGA TTAGGCGAGA GTATGAAAAT
AATCCTAAGA GTGTCATTTA TAGTTCGTTA GGCATTGATA ATATCAATTT TGGTGGTGAG
TGA
 
Protein sequence
MLIQANHMNG RVYDYNLGRF MSVDPLIQSP TSTQSVNPYS YIMNNPLAGT DPTGYACEAA 
TGSHICKSEV KATVTKEGTT AKVHLTGGTA KQQRAVANTI VNGAKTAQAT GSSLASGILS
EVGSMLWNTK QTMGSTTNSN SDNTAGEVAT AAGAASVSLS VLEHTTDGKA LVPPIGDYDS
TGQSRVMGKL EKVKPGKINQ IPLKEITKYA SRLGGALGAV AVMASYKANI AALEKGDISD
SELKGKLFAD AVVALIAFRG GKGGAIVGGA YFVADYVFSK DDVNGWIMIK RESVSAMENT
QSSISDSTRE LKAIRREYEN NPKSVIYSSL GIDNINFGGE