| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2897 |
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| Symbol | |
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| ID | 4605144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3443727 |
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| End bp | 3445322 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782308 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_928769 |
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| Protein GI | 119776029 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00596817 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.874412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATA ACGATAATAA TCAGCTGGAT TTAAACGAAT ACGCCTCATT GATTGATTTG
TTCACCAAGG CCTGTAAGCG CTTTGGCGAC AAGCCGGCTT TTGCATGTTT AGGCAAAAGC
CACAGTTTCA ATGAGATAGA CAAACTGTCG ACGGATTTTG CGGCATTTTT GCAACATCAC
ACCCAATTGC AACCGGGGGA CAAGGTCGCC ATTCAACTGC CCAACCTCAC TCAGTTTGTC
ATTGCTGCTT ATGGCGTGCT CAAGGCCGGC ATGGTGCTGG TAAACACCAA TCCGCTGTAC
ACAGAGCGTG AGCTTATTCA TCAGTTTAAA GACTCAGGGG CGAAGGTGTT GGTGGTGCTT
TCCGATCTGC TGCCGACTCT GGCCAAGGTG GTGGCTGAAA CCCCGATAGA GCTGGTGATA
TCCACCCATG CGCTGGATTT GGTCAGCCCA CAGATACAGC CCAAAACCGG ACTGAAGAAC
ATCGAGTTTC TCAAAGCCCT GAACCTTGGC AGTCAGGAAA GCTGGCAACC GGTTGCCGCC
AACCACAGCA CGCTGGCGGC ATTGCAGTAC ACGGGCGGCA CCACAGGGCT CTCCAAGGGT
GCCATGCTCA GCCACGGCAA CCTGATAGCC AACGCCCTTC AATGCCGCGA TCGCCTGGCC
AATGTCATTA CCCCCGGGGA AGACATTTTT GTTGCCCCCC TGCCCATCTA CCATATCTAT
GCGTTCCTGG TGAATCTGGT GCTTTTTGTC GAACAGGGCG CCTGCTCGGT ACTCATCCCC
AATCCCAGAG ATATTCCGTC GCTGATAAAA ACCCTGGCGA AGTATCCCTT CACCGGATTT
GCCGGGCTCA ACACCCTGTT TGTGGCCCTG TGCCATCAGG AAGAATTCCG CGCACTCGAT
TTCAGCCATC TGAAACTCAC CATTTCCGGT GGCACGGCTC TGACCGAAGC CGCAGCGGGT
CTGTGGCAGC AAACCACCGG CTGCACCATC AGCGAAGGCT ATGGATTATC GGAAACCTCA
CCGGTGATCA CCTTAAACCA GCCCGGTGCA GAACGGCTGG GCACCATAGG TCGGCCGGTG
CTGGCCACTG AAGTGCAGAT TCTGGACGAA GATGAAACCC CGGTTCCCAT GGGGCAAGCG
GGTGAACTGG CGGTGCGCGG ACCACAGGTG ATGTCCGGCT ATTGGCAGCA AGCCGGTGAA
ACCGAGCGGG TATTCAGCAA AGATGGTTTC TTCAAGACAG GTGATATTGC CATTGCCGAG
CCCGATGGCT GTTATCGCAT CGTAGATCGT AAAAAAGACA TGATTATTGT CTCAGGCTTT
AATGTGTACC CCAATGAGGT GGAGAACGTG TTAGCGAGCC ACCCCGCGGT GCTGGAGTGT
GCTGTCATCG GCGTCGCCGA TGAGCGCAGC GGCGAAGCGG TAAAAGCCGT TATCGTGCTC
AAACCATCGG TAGAAGCAGA TGACGCCAGA GCCGCCATCA CAGCCCACTG CCAGGCCAAT
CTTGCCGGCT ACAAGCAGCC CAGGCACATC GAGTTTGTGG CATCACTGCC AAAAAGCACA
GTAGGCAAAA TATTGCGCCG CGCCCTCAGA AGCTGA
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| Protein sequence | MLNNDNNQLD LNEYASLIDL FTKACKRFGD KPAFACLGKS HSFNEIDKLS TDFAAFLQHH
TQLQPGDKVA IQLPNLTQFV IAAYGVLKAG MVLVNTNPLY TERELIHQFK DSGAKVLVVL
SDLLPTLAKV VAETPIELVI STHALDLVSP QIQPKTGLKN IEFLKALNLG SQESWQPVAA
NHSTLAALQY TGGTTGLSKG AMLSHGNLIA NALQCRDRLA NVITPGEDIF VAPLPIYHIY
AFLVNLVLFV EQGACSVLIP NPRDIPSLIK TLAKYPFTGF AGLNTLFVAL CHQEEFRALD
FSHLKLTISG GTALTEAAAG LWQQTTGCTI SEGYGLSETS PVITLNQPGA ERLGTIGRPV
LATEVQILDE DETPVPMGQA GELAVRGPQV MSGYWQQAGE TERVFSKDGF FKTGDIAIAE
PDGCYRIVDR KKDMIIVSGF NVYPNEVENV LASHPAVLEC AVIGVADERS GEAVKAVIVL
KPSVEADDAR AAITAHCQAN LAGYKQPRHI EFVASLPKST VGKILRRALR S
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