| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2896 |
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| Symbol | |
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| ID | 4605143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3440784 |
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| End bp | 3443387 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782307 |
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| Product | putative TonB-dependent outer membrane receptor |
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| Protein accession | YP_928768 |
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| Protein GI | 119776028 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000792676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCCG ACAGGTCCCG AAGAGATAAA AAACATAATA AACAATTGAG AGCAAAGATG
ATGACCATAC AAGACACTAA AAAGTTTGGC TTGAGCTCAT TGAGCTTGGC AGTCTCGCTG
GCTTTGACAG GGGTTATGGG GGCAAGTGCA GCCTGGGCCG AAGAGGCGCA GGAAGAAGCA
CAGGCGAGCG ATAATATCGA GAAGATTGCC GTCGTGGGTT CTCGTGCTGC ACCTCGCTCA
GTGGGTGAAT CCCCAGTGCC GGTAGACATC ATAGGAAATG AAGAGTTCAC CAAGAATGGT
ACCACCGACA TGAACGACCT GCTTGGCAAG GTAGTTCCTT CTTATAACGT TAATGCCCAA
CCCATTTCAG ATGCCGCAAC TCTGGTGCGC CCCGCTAACA TGCGCGGTCT GGCGCCTGAC
CATACATTGA TTTTGTTAAA CGGTAAGCGT CGTCATCGTG CTGCCGTTAT TTCTTTCCTG
GGCGGTGGTG TGTCAAACGG TGCCCAGGGC CCAGACATTT CGGTGATCCC CGCTGTTGCA
CTCAAGCAGG TTGAAGTACT GCGTGATGGC GCTGCGGCCC AGTACGGCTC TGATGCTATT
GCCGGCGTGA TTAACTTCCA GCTCAAAGAC AATGCCGAAG GTGGCACCAT CGAAGCCCGT
TACGGTGAGT TTTACGAAGG GGATGGTTCC AGCCCCATGA TCGCGGCCAA CGTGGGTATG
CCACTGACTG ATAACGGTTT CTTTAACGTC AGCGCCGAAT ATAAAACCGC TGATGCCACC
AGTCGCAGCG TGCAGCGTGA TGATGCTGCC GACTTGATCG CCGCCGGTAA CACTGCCGTG
GCGAACCCCG CTCAGATTTG GGGTGCCCCT GAAACCAAAG AAGACTTTAA GTTTTTCTTT
AACGCCGGTC TGGATCTCAA TGCCAATCAA ACTGCTTACA TGTTTGGTAA CTGGGCCCGC
CGTGACGTAG AAGGTGGCTT TTACTTCCGT AACCCCAATA ACCGCGGTGG CGTATACAGC
GGTGATGATG GTGAGACGCT GCTGGTGGGT GATCTGACCG GTGATATGTC CGGTAACTGC
CCCGTTATCA CCATCACCAA CAACGTGCCT GATCCAGTGG CACTGGCACA GGTGAAGAAC
GATCCAGATT GCTTTGTGTT CAATGAAATG TTCCCCGGTG GCTTTACGCC ACGTTTTGGT
GGTGTCATTG AAGACACCTC CCTGAGCGCC GGTGTGAAAG GCACCACAGC AAGTAACCTG
AACTACGATT TTGGTGTCAG CTACGGTAAG AGTGACGCCG ATTTCTACAT CAAGAACACA
GTCAACGCCT CTCTGGGCCC AGATTCGCCT ACCGACTTCA ATCCCGGTCG TTATGTGCAG
ATGGAGCGCG GTGCGTCTCT GGATTTCAGC TACTTTGAAG TGGATGAGTG GAGCTTCGCC
GCCGGTTTGG AATTCCGCCG TGAGACCTTT GAAATCTACA ATGGCGACCC AGCCTCCTTT
GAGCTTGGCC CACTGTACAC CCAGGGTTTT GGTATCGGTT CCAACGGTTT CCCCGGCTTT
AAACCCCAGG ACTCTGGTTC ATGGAGCCGC AATAACTACG CCGCTTACTT CGATGCCGAG
CACGATCTGA CCGATAGCTG GTTGGTAACC GGTGCCCTGC GTTACGAGTA CTATGATGAT
TTCGGTTCAA CCACCAACTG GAAACTGAGC TCCATCTATA ATGTGACCGA CGACTTCTCG
CTGCGTGCCG CGGCCAGCAC CGGCTTCCGT GCTCCTACAG TGGGCCAGAG CAACGTGCGT
AACGTAACAA CGGCGTTCTC CGGTGGTCAG TTGGAAGATC AGGCAACCCT GCCTCCTACC
AACCCTATCT CCATCCAGAA AGGGGCGACA CCGCTGGAGC CGGAAACTTC GGTTAACCTG
TCATTTGGTG CCGTGTTGAC TGTGGGTGAG TTCTTCCTGA CGGCGGATTA CTTCCACATT
ACCCTGGAAG ACCGTATCAC CCAGAGTTCC AACCAGGAGC TGACCCAGGC GGATAAGGAT
GCGCTGATTG CTCAGGGTGT GCTGGATGCC AACAGCTACA GTTCAGTGCT CTACTTCACA
AATGACTTCG ATACCACGAC TCAGGGTGTC GATTTGGTTG CCAGTTACGC ACCTGATTGG
CTGGATGGCG CCAACTTTGC GCTGGCCTAT AACTGGACTG AAACCACCGT TGACAGATTC
AATCCGGACA ACATCAGCGA AGCCCGCGTG AAGGTGCTTG AAGAAGCGCT CCCACACCAC
AAGGGTACCC TGACCTGGAC CCAGGAGCTG GGTGCCAACC TGCGCTCTAT GGTTCGCATG
AACTACTACG GTGAGTTCTA TGAAGACCAC CTGGATTCAG AAGGTGATTT GCCAATCTAC
AATGGCTCTA CTGTGACCTT TGACGCTGAA GTAGGTTATG ACTTCAACGA CAACTGGAGC
CTGGCAGTGG GTGCACAAAA CCTGTTTGAT ACCTACCCAG ATGACAACCC ATGGGCCGGT
ATTGCGGGTG CGGCTTACCC TGTGACTTCA CCCTATGGAT TCAACGGCGG TTACTACTAC
GCACGTCTGA ATTACAACTT CTGA
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| Protein sequence | MVADRSRRDK KHNKQLRAKM MTIQDTKKFG LSSLSLAVSL ALTGVMGASA AWAEEAQEEA
QASDNIEKIA VVGSRAAPRS VGESPVPVDI IGNEEFTKNG TTDMNDLLGK VVPSYNVNAQ
PISDAATLVR PANMRGLAPD HTLILLNGKR RHRAAVISFL GGGVSNGAQG PDISVIPAVA
LKQVEVLRDG AAAQYGSDAI AGVINFQLKD NAEGGTIEAR YGEFYEGDGS SPMIAANVGM
PLTDNGFFNV SAEYKTADAT SRSVQRDDAA DLIAAGNTAV ANPAQIWGAP ETKEDFKFFF
NAGLDLNANQ TAYMFGNWAR RDVEGGFYFR NPNNRGGVYS GDDGETLLVG DLTGDMSGNC
PVITITNNVP DPVALAQVKN DPDCFVFNEM FPGGFTPRFG GVIEDTSLSA GVKGTTASNL
NYDFGVSYGK SDADFYIKNT VNASLGPDSP TDFNPGRYVQ MERGASLDFS YFEVDEWSFA
AGLEFRRETF EIYNGDPASF ELGPLYTQGF GIGSNGFPGF KPQDSGSWSR NNYAAYFDAE
HDLTDSWLVT GALRYEYYDD FGSTTNWKLS SIYNVTDDFS LRAAASTGFR APTVGQSNVR
NVTTAFSGGQ LEDQATLPPT NPISIQKGAT PLEPETSVNL SFGAVLTVGE FFLTADYFHI
TLEDRITQSS NQELTQADKD ALIAQGVLDA NSYSSVLYFT NDFDTTTQGV DLVASYAPDW
LDGANFALAY NWTETTVDRF NPDNISEARV KVLEEALPHH KGTLTWTQEL GANLRSMVRM
NYYGEFYEDH LDSEGDLPIY NGSTVTFDAE VGYDFNDNWS LAVGAQNLFD TYPDDNPWAG
IAGAAYPVTS PYGFNGGYYY ARLNYNF
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