Gene Sama_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2890 
Symbol 
ID4605137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3432116 
End bp3433525 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content56% 
IMG OID639782301 
ProductSulfate adenylyltransferase 
Protein accessionYP_928762 
Protein GI119776022 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2895] GTPases - Sulfate adenylate transferase subunit 1 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR02034] sulfate adenylyltransferase, large subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTG CACAGCAAGT TAAAGATCTT GGTATTGAGC AATACCTGGA AAGACAACAG 
CATAAGTCGC TGCTTAAATT CCTCACCTGT GGCTCTGTGG ACGATGGCAA GTCGACCCTG
ATTGGTCGTC TGCTGCACGA CAGCGCCCAG ATTTACGAGG ATCAGCTGGC CGCCCTGTCC
AAAGACTCCA AGGTACACGG TACCACGGGT GAGGCCATCG ATTTGGCGCT GCTGGTAGAC
GGCCTGCAGG CCGAGCGCGA GCAGGGCATC ACCATCGATG TGGCTTACCG CTATTTCTCC
ACCGAGAAGC GCAAGTTCAT CATCGCCGAC ACCCCCGGCC ACGAACAGTA CACCCGCAAT
ATGGCCACGG GCGCGTCCAA CTGCGACCTG GCCATCATTC TGGTGGATGC CCGCTACGGC
GTGCAAACCC AGACCCGTCG CCACAGCTTT ATCTGCTCGC TTTTGGGCAT CAAGCAGTTT
GTGGTGGCCG TCAACAAGAT GGACTTGCTG GGCTTTGATG AAGCGCGCTT TGAAGAAATC
AAACGCGAGT ATCTCGCCTT TGCCGAGCAG CTTAAGGTAC CGGACATCAA GTTTGTGCCC
CTGTCGGCCC TCAAGGGCGA CAACGTGGTC AGCCGCTCAG AGCAAAGCCC CTGGTACAGC
GGCGAAACCT TGCTGTCGAT TCTCGAAAAT GCCCCGGTTA CCGGTGCCAA CCGTGACTTT
GAAGCCCGCC TGCCGGTGCA GTACGTGAGC CGCCCGAACC TGGATTTCCG TGGTTTTGCC
GGCACCATTG CCAGCGGCAG TTTCAAAGTG GGTGATGCGG TCAAGGCCCT GCCTTCCGGT
AAAGCCTCCA CGGTTAAAAG CATTGTCACT TTCGATGGTG AGCTTGGTGA GGCCTTTGCC
GGTCAGGCCG TGACCCTGAC GCTGAATGAT GAAATCGATA TCAGCCGTGG CGATGTGATA
GTGCCTGCAT CAAGCGATGT GACCGTATCC AATCGGCTGC TGGCCAAGGT GGTGTGGATG
CACGAGCAGC CACTGACTCC GGGTAAGCAG TACAACATCA AGCTGGGTAC CCGTAAGGTG
CCGGGTACGG TGCGCCACAT CATTCACAGC ATAGATGTGA ACACCTTGGC CGAAGACAAG
GCCACAGCGC TGCCACTCAA TGGCATTGCC CTGGTGGAGC TTGAGCTGGA TGAAGCCGTG
GTGTTTGACC CCTACCAGGA TAACCGCGAT ACCGGTGGAT TTATCTTTAT CGACCGTATC
AGCAACATCA CAGTGGGCGC AGGACTGGTG GAAAGCGCGC TGGAAGCCGA GCACAAAACG
ACGGATTTCA GTGAGTTTGA GCTTGAGCTC AATGCCCTTA TCCGCAAGCA CTTCCCCCAC
TGGCAGGCGC TGGATATCAG TAAGCAGTAG
 
Protein sequence
MSIAQQVKDL GIEQYLERQQ HKSLLKFLTC GSVDDGKSTL IGRLLHDSAQ IYEDQLAALS 
KDSKVHGTTG EAIDLALLVD GLQAEREQGI TIDVAYRYFS TEKRKFIIAD TPGHEQYTRN
MATGASNCDL AIILVDARYG VQTQTRRHSF ICSLLGIKQF VVAVNKMDLL GFDEARFEEI
KREYLAFAEQ LKVPDIKFVP LSALKGDNVV SRSEQSPWYS GETLLSILEN APVTGANRDF
EARLPVQYVS RPNLDFRGFA GTIASGSFKV GDAVKALPSG KASTVKSIVT FDGELGEAFA
GQAVTLTLND EIDISRGDVI VPASSDVTVS NRLLAKVVWM HEQPLTPGKQ YNIKLGTRKV
PGTVRHIIHS IDVNTLAEDK ATALPLNGIA LVELELDEAV VFDPYQDNRD TGGFIFIDRI
SNITVGAGLV ESALEAEHKT TDFSEFELEL NALIRKHFPH WQALDISKQ