| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2870 |
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| Symbol | |
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| ID | 4605117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3407998 |
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| End bp | 3409026 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782281 |
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| Product | dihydroorotase |
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| Protein accession | YP_928742 |
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| Protein GI | 119776002 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0418] Dihydroorotase |
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| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATT TGACCCTCAC CCGTCCCGAT GACTGGCATA TCCACCTGCG CGACGGCGAC
TCCCTTGCCG ACACTGTGCG CGACGCCGGT CGTTACATGG GCCGTGCCAT AGTAATGCCC
AATCTGGTGC CGCCGGTGAC CACTACAGAA GCCGCGATTG CCTACTACGA GCGCATCAAG
GCCCACAGCA GCACTGCCTT CGAGCCCTTA ATGGTGCTGT ATCTCACCGA CAAGACCAGC
CCGGATGAAA TCCGCGCCGC CAAGGCCTCC GGCAAGGTGG TTGCCGCCAA GCTTTATCCT
GCCGGTGCCA CCACCAACTC TGATTCGGGC GTGACCGACG TCAACAACAT CTATGGCGTG
CTCAAGGCCA TGGAAGAAGA AGGTTTACTG CTGCTGGTAC ACGGTGAGGT CACTGATTCT
GCTATCGATA TTTTCGACAG GGAGCGCATC TTTATCGAAA ACATCCTCTC CAAAGTGGTC
GCCGACTTTC CCGGCCTCAA GATAGTGCTC GAGCACATCA CTACCAAGGA TGCGGTGGAT
TTCGTGATGT CTGCCGGTGA CAATGTCGCC GCCACCATCA CAGCCCATCA CCTGCTGTAT
AACCGCAACC ATATGCTGGC CGGCGGTATT CGCCCGCACT TCTACTGCCT GCCCATCCTT
AAGCGCAATA CCCACCAGCA GGCGCTGTTG GCAGCGGCCA CCAGCGGCAG CAAGAAGTTT
TTCCTTGGCA CCGACTCGGC TCCCCACGCC AAAGACAAAA AAGAAGCCGC CTGTGGCTGC
GCCGGTTCTT ACACAGCCCA CGCGGCACTG GAACTGTACG CTGAAGCCTT TGAGGCGGAA
GGTGCCCTGG ACAAGCTGGA AGCCTTTGCC AGCTTTAATG GCCCGGACTT CTACGGCCTG
CCCCGCAATG CCGATACCGT TGCTCTGGTG AAAAGTCCCT GGCAGGTGCC CGAGTCTTAT
CCCCTGGGCA GCACCACTGT GGTGCCTATC CGTGCAGGTG AAATCATTGG CTGGAAAGTC
GAAGACTGA
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| Protein sequence | MTHLTLTRPD DWHIHLRDGD SLADTVRDAG RYMGRAIVMP NLVPPVTTTE AAIAYYERIK
AHSSTAFEPL MVLYLTDKTS PDEIRAAKAS GKVVAAKLYP AGATTNSDSG VTDVNNIYGV
LKAMEEEGLL LLVHGEVTDS AIDIFDRERI FIENILSKVV ADFPGLKIVL EHITTKDAVD
FVMSAGDNVA ATITAHHLLY NRNHMLAGGI RPHFYCLPIL KRNTHQQALL AAATSGSKKF
FLGTDSAPHA KDKKEAACGC AGSYTAHAAL ELYAEAFEAE GALDKLEAFA SFNGPDFYGL
PRNADTVALV KSPWQVPESY PLGSTTVVPI RAGEIIGWKV ED
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