Gene Sama_2869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2869 
Symbol 
ID4605116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3406992 
End bp3407819 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content57% 
IMG OID639782280 
ProductABC transporter, periplasmic substrate-binding protein, putative 
Protein accessionYP_928741 
Protein GI119776001 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATTC TGTCGTATTT TATAGTGTTG CTGGCACTGA CTCCTCCGCT TGCCCGGGCG 
GAAGCGGGGC GCGCCGAGCG CATCATTGCG CTTTCTCCCC ATTCGGTGGA AATGCTCTAC
GCCATTGGGG CCGGTGATGC CATCCTTGCC ACCACAGATC ATGCCGACTA TCCCGAGGCC
GCCAAAGCGA TCCCCCGCAT CGGCGGCTAT TACGGTATCC AGATGGAGCA GGTGCTGGCA
CTTAAACCGG ATTTGATTGT GACCTGGGAA GGGGGCAACC GCGCCGAAGA CCTGGAGATG
CTGAAGAAGT TTGGCTTTAC CCTGTTTCAC AGCAATCCCA GGACGCTGGA GCAGGTGGGG
CAGGAGCTTA TTGCCCTGGG CAAATTAACC GGCAGGGAGA CGCAGGCGCA GCAAGTGGCC
GATGACTATC TGGCCCGGCT CGGCGCTTTG CGCCAGGAGT ATGCCGCCAA GCCCAAAGTA
AGGCTGTTCT ATCAGCTCTG GTCACAACCT TTGATGACGG TCGGCAAAGG CAGCTGGATT
GAGCAAATCA TTCAAACCTG CCATGGTGAA AATGTGTTTC TGGACACCCA GGGTGACTAC
CCTCAGGTCA GTATCGAAAC CGTTCTTTTG AAAAAGCCCG AGGTGATTTT ACGCAGCCAG
GATGAGGGCA ATATCAACGG CATTGACTGG CAGCAATGGC CAGAGGTACC CGCAGTCGCC
AAGGGCCACA TCTATGCCCT GGATGCCGAT TTGCTGCACC GTGCAGGCCC AAGGGCCATT
GATGGTGTAC AGGCGCTCTG TCAGGCGTTG GATAAGGCCC GTCAGTAA
 
Protein sequence
MKILSYFIVL LALTPPLARA EAGRAERIIA LSPHSVEMLY AIGAGDAILA TTDHADYPEA 
AKAIPRIGGY YGIQMEQVLA LKPDLIVTWE GGNRAEDLEM LKKFGFTLFH SNPRTLEQVG
QELIALGKLT GRETQAQQVA DDYLARLGAL RQEYAAKPKV RLFYQLWSQP LMTVGKGSWI
EQIIQTCHGE NVFLDTQGDY PQVSIETVLL KKPEVILRSQ DEGNINGIDW QQWPEVPAVA
KGHIYALDAD LLHRAGPRAI DGVQALCQAL DKARQ