Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2869 |
Symbol | |
ID | 4605116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3406992 |
End bp | 3407819 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782280 |
Product | ABC transporter, periplasmic substrate-binding protein, putative |
Protein accession | YP_928741 |
Protein GI | 119776001 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAATTC TGTCGTATTT TATAGTGTTG CTGGCACTGA CTCCTCCGCT TGCCCGGGCG GAAGCGGGGC GCGCCGAGCG CATCATTGCG CTTTCTCCCC ATTCGGTGGA AATGCTCTAC GCCATTGGGG CCGGTGATGC CATCCTTGCC ACCACAGATC ATGCCGACTA TCCCGAGGCC GCCAAAGCGA TCCCCCGCAT CGGCGGCTAT TACGGTATCC AGATGGAGCA GGTGCTGGCA CTTAAACCGG ATTTGATTGT GACCTGGGAA GGGGGCAACC GCGCCGAAGA CCTGGAGATG CTGAAGAAGT TTGGCTTTAC CCTGTTTCAC AGCAATCCCA GGACGCTGGA GCAGGTGGGG CAGGAGCTTA TTGCCCTGGG CAAATTAACC GGCAGGGAGA CGCAGGCGCA GCAAGTGGCC GATGACTATC TGGCCCGGCT CGGCGCTTTG CGCCAGGAGT ATGCCGCCAA GCCCAAAGTA AGGCTGTTCT ATCAGCTCTG GTCACAACCT TTGATGACGG TCGGCAAAGG CAGCTGGATT GAGCAAATCA TTCAAACCTG CCATGGTGAA AATGTGTTTC TGGACACCCA GGGTGACTAC CCTCAGGTCA GTATCGAAAC CGTTCTTTTG AAAAAGCCCG AGGTGATTTT ACGCAGCCAG GATGAGGGCA ATATCAACGG CATTGACTGG CAGCAATGGC CAGAGGTACC CGCAGTCGCC AAGGGCCACA TCTATGCCCT GGATGCCGAT TTGCTGCACC GTGCAGGCCC AAGGGCCATT GATGGTGTAC AGGCGCTCTG TCAGGCGTTG GATAAGGCCC GTCAGTAA
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Protein sequence | MKILSYFIVL LALTPPLARA EAGRAERIIA LSPHSVEMLY AIGAGDAILA TTDHADYPEA AKAIPRIGGY YGIQMEQVLA LKPDLIVTWE GGNRAEDLEM LKKFGFTLFH SNPRTLEQVG QELIALGKLT GRETQAQQVA DDYLARLGAL RQEYAAKPKV RLFYQLWSQP LMTVGKGSWI EQIIQTCHGE NVFLDTQGDY PQVSIETVLL KKPEVILRSQ DEGNINGIDW QQWPEVPAVA KGHIYALDAD LLHRAGPRAI DGVQALCQAL DKARQ
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