Gene Sama_2868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2868 
Symbol 
ID4605115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3406378 
End bp3406824 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID639782279 
Producthypothetical protein 
Protein accessionYP_928740 
Protein GI119776000 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGTA TGGTTTATTT CGCTTTTGTA TTACTGGTAT TGGCAGGTTG TCAGGCAACA 
GATAATTCGG CTGACAAACA AGATTACCTG GATCTCACCA ACCAGGAAAA TTCAGATAAA
CCAATATCAT ATTGGACTGA AAATTATAGC CCCGTTCCAG CGTTTCCCAT CAGTGCAGCC
AAGAAGTCGC TCTCTGGTTG TGTCACCTTA TCGGTAAACA TCAATACCCA TGGCAAGATT
GATGGCTATA AAGTTATCCA CTCATATCCC GGTGAGGTGT TTGTGCCTTC AGTGCTGGCA
GCCCTTAAAA AATGGCGTTG GGAACCCACA AAAGAAAACC TCGAACGAGT TCCTGCGATA
CAGATAGTGG GTCTGACTTT GGAAATTAAG GACGCAAAAA ACAAAGCAGA TTTTCGAAAG
CAGTGCGAAG CATTTGTTCA ATCTTGA
 
Protein sequence
MRGMVYFAFV LLVLAGCQAT DNSADKQDYL DLTNQENSDK PISYWTENYS PVPAFPISAA 
KKSLSGCVTL SVNINTHGKI DGYKVIHSYP GEVFVPSVLA ALKKWRWEPT KENLERVPAI
QIVGLTLEIK DAKNKADFRK QCEAFVQS