Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2864 |
Symbol | |
ID | 4605111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3402800 |
End bp | 3403492 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639782275 |
Product | ABC transporter related |
Protein accession | YP_928736 |
Protein GI | 119775996 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACCA TGAAGAATAT CAATAAATTG TTCCGTACAG ACCTGGTGGA GACCCATGCG CTGCGGGACT TTAACCTGGA GGTGGCCGAA GGGGAGTTTG TGGCCGTAAC CGGACCTTCA GGCTCGGGAA AAACCACTTT TTTGAATATT GCCGGCTTGC TGGAAAATGC CTCCGGCGGT GAATACTGGC TCGATGGTGA GAACGTGGCC AACCTCAGTG ACAGTGCGGC AGCCAGGGTG CGAAATCAGA AAATCGGTTT TATTTTTCAG GGCTTTAACC TTATTCCGGA TTTAAACCTG GCCGAAAACG TGGAGCTGCC CCTGCGTTAC CGTGGTTTTG GCAGCAGCGA GCGCAAGCGC CGAGTGGAGC AGGCCCTGTC CCAGGTGGGG CTCGCCGCAC GACAAAAACA CCTGCCATCC CAGTTGTCCG GTGGTCAGCA GCAACGGGTG GCCATCGCCC GCGCGCTGGC AGGCGAGCCC CGTTTTTTGC TGGCGGATGA GCCGACGGGT AACCTCGATT CACTGATGGC CCGTCAGGTG ATGGAGCTTT TGGAAGACAT TAATCGCCAG GGTACCACCA TCATCATGGT GACCCACGAT GGTGAGCTGG CCCGCCGCGC TGAGCGCAAC ATCCAGATAG TCGATGGCCA GGTGTGTGAT TTCCTCACCA GCCGCGCCGT GGTTAACGGA TAA
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Protein sequence | MLTMKNINKL FRTDLVETHA LRDFNLEVAE GEFVAVTGPS GSGKTTFLNI AGLLENASGG EYWLDGENVA NLSDSAAARV RNQKIGFIFQ GFNLIPDLNL AENVELPLRY RGFGSSERKR RVEQALSQVG LAARQKHLPS QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV MELLEDINRQ GTTIIMVTHD GELARRAERN IQIVDGQVCD FLTSRAVVNG
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