Gene Sama_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2864 
Symbol 
ID4605111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3402800 
End bp3403492 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content57% 
IMG OID639782275 
ProductABC transporter related 
Protein accessionYP_928736 
Protein GI119775996 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACCA TGAAGAATAT CAATAAATTG TTCCGTACAG ACCTGGTGGA GACCCATGCG 
CTGCGGGACT TTAACCTGGA GGTGGCCGAA GGGGAGTTTG TGGCCGTAAC CGGACCTTCA
GGCTCGGGAA AAACCACTTT TTTGAATATT GCCGGCTTGC TGGAAAATGC CTCCGGCGGT
GAATACTGGC TCGATGGTGA GAACGTGGCC AACCTCAGTG ACAGTGCGGC AGCCAGGGTG
CGAAATCAGA AAATCGGTTT TATTTTTCAG GGCTTTAACC TTATTCCGGA TTTAAACCTG
GCCGAAAACG TGGAGCTGCC CCTGCGTTAC CGTGGTTTTG GCAGCAGCGA GCGCAAGCGC
CGAGTGGAGC AGGCCCTGTC CCAGGTGGGG CTCGCCGCAC GACAAAAACA CCTGCCATCC
CAGTTGTCCG GTGGTCAGCA GCAACGGGTG GCCATCGCCC GCGCGCTGGC AGGCGAGCCC
CGTTTTTTGC TGGCGGATGA GCCGACGGGT AACCTCGATT CACTGATGGC CCGTCAGGTG
ATGGAGCTTT TGGAAGACAT TAATCGCCAG GGTACCACCA TCATCATGGT GACCCACGAT
GGTGAGCTGG CCCGCCGCGC TGAGCGCAAC ATCCAGATAG TCGATGGCCA GGTGTGTGAT
TTCCTCACCA GCCGCGCCGT GGTTAACGGA TAA
 
Protein sequence
MLTMKNINKL FRTDLVETHA LRDFNLEVAE GEFVAVTGPS GSGKTTFLNI AGLLENASGG 
EYWLDGENVA NLSDSAAARV RNQKIGFIFQ GFNLIPDLNL AENVELPLRY RGFGSSERKR
RVEQALSQVG LAARQKHLPS QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV
MELLEDINRQ GTTIIMVTHD GELARRAERN IQIVDGQVCD FLTSRAVVNG