| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2851 |
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| Symbol | |
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| ID | 4605098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3390084 |
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| End bp | 3391622 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782262 |
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| Product | transporter, putative |
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| Protein accession | YP_928723 |
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| Protein GI | 119775983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC CAACGAATCT TTCGGGCAAC GACCTCAGCG AAGTCAAACA GCTCGGTATG
TGGGCCTCCA TCATGAGCCT GGGCTACATT TTCTGGCTGG TGGGCGGCAT GGAGCTGGTG
GAGCGCATTG CCTATTACGG CGTGAAGGCC AGTGCCGGCC TCTATGCCAA GGCGCCCGAA
TCCCAGGGTG GCCTGGGTAT TTCCCTTTCT GACTACGGCA TCATTATCTC GACCTGGGCG
ATACTGCAAA CCTTTATCCC GGTGTTTACC GGCGGTATCT CCGACCGGGT GGGCTACAAA
GAAACCATCT TCGCCTCCAC CATCATTAAA ATTGCCGGCT ACCTGTGTAT GGCCTTTTTC
CCCAGCTTCT GGGGCTTTTT GGCAGGCGCC ATGCTGCTGG CTGCCGGTAC GGGTATCTTC
AAGCCCGGTA TTCAGGGCAC CCTGGTACTG GCAACCCGCC GCGACAACAG TTCCATGGCC
TGGGGGATTT TCTATCAGGT GGTGAATATC GGCGGCTTCC TCGGCCCCCT GGTTGCCGTG
CATATGCGCC AACTCTCCTG GGACAATGTG TTTTACGCCT GCGCCGCGAT TATCTCGCTT
AACTTTCTGT TTTTGCTTAC CTATAAAGAG CCCGGCAAAG AAGCACGTCT GGAGCGCCAG
CGCAAAATCA AGGCGGGCGA TCTGAAGCAG GACTTCCTGT GGAAAGACGC CTGGAATGAG
CTGAAAAAGC CGGTGGTGAT TTACTACATG CTGGTATTTG CCGGTTTCTG GTTTTTGTTC
AACTCCCTCT TCGATGTGCT GCCCATTCAC ATTGCCGAAT GGGTGGATAC CAGCGTGATT
GTTTCGACCC TGTTTGGCGA AGAAGGTACC CGCAACGGCA TTTTGCAGTT CTGGCTGGGA
CTGAATAACG AAGGCACCAA GGTGATGCCG GAAGGCATGC TGAACCTGAA CGCGGGCCTG
ATTATGACCA GCTGCTTTTT GGTGGCGGCC CTGACTGCCA AGTACCGCAT CACCACTGCC
ATGCTGTGGG GCTGCCTCCT GTCTATCGGT GCCTTTGTGA TGATTGGTGC CACCCACGCC
GCCTGGTATA TAGTGCTGGC GATTGCCATG TTCTCTTTGG GTGAAATGAT GATAAGCCCC
AAAAAGAACG AGTTTATGGG CAATATCGCC CCCGAAGGCA AAAAGGCCAT GTACCTGGGC
TTTGTAATGC TGCCACAGGG CATAGGCTGG GGTCTTGAGG GATATTTTGG TCCCAAGTTG
TATGAGATGT ATGCCTCAAA AGAGAAATTC GCCCGTCAGA TGCTGGGAGA AGAAGGCATG
AGCAGCGCCG ATGTGGCCGC TATTCCCCAG GGTGAAGCCT TTACCCGACT GGTGGAATTT
ACCGGCCGCG GCAGCCGTGA GCTGACCGAA GTTCTCTATA ACGCCCACAA TATCGGTATG
GCCTGGTACA TCATTGCCGC CATTGGCACC CTCTCCGCGG TGGGTATTTT TATCTACGGC
AAGTGGCTGT TTAAGATGCA GCAACAAAAT CCGGCGTAA
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| Protein sequence | MSQPTNLSGN DLSEVKQLGM WASIMSLGYI FWLVGGMELV ERIAYYGVKA SAGLYAKAPE
SQGGLGISLS DYGIIISTWA ILQTFIPVFT GGISDRVGYK ETIFASTIIK IAGYLCMAFF
PSFWGFLAGA MLLAAGTGIF KPGIQGTLVL ATRRDNSSMA WGIFYQVVNI GGFLGPLVAV
HMRQLSWDNV FYACAAIISL NFLFLLTYKE PGKEARLERQ RKIKAGDLKQ DFLWKDAWNE
LKKPVVIYYM LVFAGFWFLF NSLFDVLPIH IAEWVDTSVI VSTLFGEEGT RNGILQFWLG
LNNEGTKVMP EGMLNLNAGL IMTSCFLVAA LTAKYRITTA MLWGCLLSIG AFVMIGATHA
AWYIVLAIAM FSLGEMMISP KKNEFMGNIA PEGKKAMYLG FVMLPQGIGW GLEGYFGPKL
YEMYASKEKF ARQMLGEEGM SSADVAAIPQ GEAFTRLVEF TGRGSRELTE VLYNAHNIGM
AWYIIAAIGT LSAVGIFIYG KWLFKMQQQN PA
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