Gene Sama_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2848 
Symbol 
ID4605095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3387689 
End bp3388429 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content57% 
IMG OID639782259 
ProductSpoOM-related protein 
Protein accessionYP_928720 
Protein GI119775980 
COG category[R] General function prediction only 
COG ID[COG4326] Sporulation control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.942777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA AAATACTGGC TGCCGTAGGC ATTGGCAGTG CCAAGGTGGA TACCCGTTTA 
CACCAAAGCC AGCTGCTGCC GGGACAAACC TTCAGCGCCA CCATAGTGGT GCAGGGGGGT
GACGTGGCGC AAAAAATCGA TGGCATCGAT TTGGCGCTGA TGACCAGGGC CAAGGTCAGC
ACTGACAATG GCGACTACTT TAAAAATCAT TGCCTCGCCC GTTGGCGGGT GGCCGAGCGC
TTTGAAATCC AGCCCGGCGA AGTGCGTGAA ATCCCCTTCA GCGGTCAATT GCATCCCGAA
ACCCCCTTTA CCGCGCTGCC GGTACGAAAC AATCAGTGCC ATGTGTGGCT GCAAACCGGC
GCCGATATTG ATTCGGCAAT TGACCCGACC GATGCCGATG TCATCGACAT ACTGCCAACG
CCGCTGCTTG GCCATGTGCT GAATGCCATG CAGGAGCTGG GTTTTGTCCT CACCAAGGCC
GATGTGGAGC AGGGCTATTT GAGCGCCCCG GGATTTCGCT CCCGCTCAGG CTGTTATCAG
GAGCTTGAAT TCCACCCCCG CAGCTTTGGC TTCTCCAGCC TGAGGGAAGT GGAAATCTCT
TTGGTGTGCG AAGCTGGCGA GACCCACCTT TTGATTGAGC TTGACCGCGC CTTTCGCGGT
GACGGCTACC GCGCGTTTTC CATTGCCAAC AACGCCAGCG CTGGCGAGGT CTTCACCCAG
CTTAAGCACT ACATCCGCTG A
 
Protein sequence
MFKKILAAVG IGSAKVDTRL HQSQLLPGQT FSATIVVQGG DVAQKIDGID LALMTRAKVS 
TDNGDYFKNH CLARWRVAER FEIQPGEVRE IPFSGQLHPE TPFTALPVRN NQCHVWLQTG
ADIDSAIDPT DADVIDILPT PLLGHVLNAM QELGFVLTKA DVEQGYLSAP GFRSRSGCYQ
ELEFHPRSFG FSSLREVEIS LVCEAGETHL LIELDRAFRG DGYRAFSIAN NASAGEVFTQ
LKHYIR