| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2847 |
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| Symbol | |
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| ID | 4605094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3386120 |
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| End bp | 3387403 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782258 |
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| Product | putative MFS transporter family protein |
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| Protein accession | YP_928719 |
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| Protein GI | 119775979 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.778144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.676693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCG ATATTTCCCT TGCCAGAGTG AAACAGTTTC CCCGCCTGAT GTGGATTTTA
CTGTTTGGGT CCTTTATTAC CCGGGGCAGC TACTACATGG TGTGGCCCTT TCTGGCGGTG
ATCCTCTATG AACGCTTTGG TTTGTCGGCC ACCAACGTTG GCCTGATTTT ATCCTCTGCT
GCCCTGCTCT CAGTGCTGGT CAGTTTTATC GGCAGTGCCC TGTCCGACAG GATTGGCAGA
CAAAAGATGA TGTATGGCGC AGGCGTGCTC TATATTATTT CGTTTTCGCT GCTGGCCGAG
GCCGATTCGG TAGCCGGATT TGCGCTGGTC ATCACCCTCT GCTCCATCGC CACCTCACTG
TGGCGGCCGC TGGTATCGGC TCTGATTGGT GACATCATCC ACGAGTCCCA AACCCGCGAG
CTTGCGATGC AGAGTCTGTA TTTTATTGTG AATGTGGGCT GCGCCGTGGG ACCCATTGCC
GGTGTCTGGC TGGGGTTAAC CGGCGAGCAG TCGAGTTTTT ACATCACCAC AGTGGCTTTT
GCTATTTTGC TGTTGCTGCT TTGGTGGGGC TTTGTCAACC ACGAGTTTAC CCAGGCGACT
CATCCTGGGC AGTTCGGCGA GGAAGGGAAT ACGGCCAACT CTGGCAGCGA TGACCAGGCA
GCATCCGGGA TGCGCCATAC CCTGCGGGTG CTGGCGAGTG ACAGGCTGCT GCAAAGCCTT
ATTCTGGCCA ATGTTATCTG CATGTTTATC TTCGGCCAGA TGGATGGCTC TCTGGTGCAG
TACCTAAGCC GTGCCGGAGT GCCCAATGTG CTTGAGCTTA TCTCCTCGAT GATCTTCGCC
AATGCCATGA TCATCATCAC CTGCCAGTTT TTGCTGCTTA AACTGATGGC CCACTGGTCT
TTGGTGAAGC GTATTCAGGT GGCGCTGGTG CTGCTAATCG CATCGCAGCT GTGGATGGGG
TTAAACCCGG TTGACTTATT CTGGGGCTGG ATTGGCGCCG TGATTGTGAT GAGTCTGGCG
GAGGCGGTGC TGTTCCCCAC CATGAACGTA CATATCGACC GCATTGCCCC GCGCCATCTG
CGCGGTGCCT ATTTTGGCGC ATCGTCTTTC TATGAATTTG GCTTTGCTTT GGCGCCTCTG
GGCGGCGGCA TAGTGCTGGA TCTGCTAAAC GGTTCTTGGC TGTTCCTCGG CTGCGCCGCC
CTCACCCTGC TGGTGATGTA TTTGTACAGC AAGCTGGAAA ACCTGTCCCG CCCCGACTTT
GCGACGGAGC GGGTAGAGCA TTAA
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| Protein sequence | MQSDISLARV KQFPRLMWIL LFGSFITRGS YYMVWPFLAV ILYERFGLSA TNVGLILSSA
ALLSVLVSFI GSALSDRIGR QKMMYGAGVL YIISFSLLAE ADSVAGFALV ITLCSIATSL
WRPLVSALIG DIIHESQTRE LAMQSLYFIV NVGCAVGPIA GVWLGLTGEQ SSFYITTVAF
AILLLLLWWG FVNHEFTQAT HPGQFGEEGN TANSGSDDQA ASGMRHTLRV LASDRLLQSL
ILANVICMFI FGQMDGSLVQ YLSRAGVPNV LELISSMIFA NAMIIITCQF LLLKLMAHWS
LVKRIQVALV LLIASQLWMG LNPVDLFWGW IGAVIVMSLA EAVLFPTMNV HIDRIAPRHL
RGAYFGASSF YEFGFALAPL GGGIVLDLLN GSWLFLGCAA LTLLVMYLYS KLENLSRPDF
ATERVEH
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