Gene Sama_2836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2836 
Symbol 
ID4605083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3374003 
End bp3374542 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID639782247 
Productthiol:disulfide interchange protein, putative 
Protein accessionYP_928708 
Protein GI119775968 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.399534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCA CTCTCAGCAC CCTGATGACC CTGCTCCTCG TTGCCGCCGT GGTGGCGCTG 
CTGATTGCCC GCAGCAAGGG TAAACCCATC CCACTGGCGG TGATCCCCGT TATCGGGATG
ATGGCGCTGA TGGTGGGCTC GGCCACCTAC TTTGTGCACA GGGCCAGTGA GCAACAGGAC
TATCGTGAGC TGTTATGGCA GCCGCTGGCT GCGGATAAAA TTCCCATGCT GGTTCAGGGT
GGTTACACCG TCTTTGTGGA TTTGCATTCC GACTGGTGCA TGGCCTGCCA AACCAACCGG
GTTGGCATAC TGCACCGCCC CGAGGTGGTC AGCACCCTGC TGTCGGGCAA GGTAGTGTTG
ATGCAGGCCA ACTGGAGCCA GGAGTCCGAG CGCATTGCGC CCCATTATGG CAAGGTAGCT
GCACCCGGCT CGCCTTTTAA CAAGGTTTAT GGCCCGGGAC TGCCAAGGGG CCAGATATTA
CCGGCCGAAC TGAGCGCTTC TGATGTCATC ACCGCCATCA GAAGCGCCAA AGGCAGCTGA
 
Protein sequence
MILTLSTLMT LLLVAAVVAL LIARSKGKPI PLAVIPVIGM MALMVGSATY FVHRASEQQD 
YRELLWQPLA ADKIPMLVQG GYTVFVDLHS DWCMACQTNR VGILHRPEVV STLLSGKVVL
MQANWSQESE RIAPHYGKVA APGSPFNKVY GPGLPRGQIL PAELSASDVI TAIRSAKGS