Gene Sama_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2835 
Symbol 
ID4605082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3372337 
End bp3373875 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content57% 
IMG OID639782246 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_928707 
Protein GI119775967 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.451295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAGA GTAATCAACC CCAGCAAAGC ATTCCCGTTA CTTTCATCCC CTCCAGTGAA 
GAGCCTTCAG CGCATAAGGA GCCCTCTGCG TACAAGGAGC CTTCAGCGCA CAAGGAGCCT
TCAGCGCATA AGAAGCCTTC GGCGAATGGC GGACCATCGG CCCCAAAAAA GCCGTCATCA
AAAACGGAAT CCAAAAGCGG CGGCAAAATT CAGTTTCGAA GCCAGCCAGG TCTGTTTCAG
CGTTGGCGCA GTGCCACCGG AACTGGCCTC ATCGCGCTGT TTTTTCTGCT GCCCTTTATC
AGCTGGCATG GGCGTCAGGC CATTTGGTTT GATTTGAGCA ATCAGCAGTT TTACTTCTTT
GGCACCAGCC TGTGGCCCCA GGATTTTACC CTGCTGGCCT GGGTCTTTAT TGCCGCGGCC
TTTGGTCTCT TTTTCGTGAC CCTGTTTTGG GGCCGGGTCT GGTGCGGCTT TTTATGCCCG
CAAACCCAAT GGACCTTTAT GTTTGCCTGG GTCGAAGAAA AGTTTGAAGG CAGCCGCAAT
CAACGCATCA AGCTCGATAA GGCGCCCTGG AGCCGGGAGA AGCTCAGCAA ACGGCTTGGG
AAACACAGCA GCTGGCTGCT GATGTCACTG CTCACTGGCT GCGGCTTTAT CGCCTATTTC
GTGCCGGCGC GGGAGCTGTA TCCCGCCATC TTCAGCTTCA GCGGAGGCTT TTGGGACACG
GCCTGGGTGT GGTTTTTTGC TATCTGCACC TACCTCAACG CCGGGTGGAT GCGCGAGCAA
ATGTGCCTGC ACTGCTGCCC CTATGCCCGT TTCCAATCTG CCATGTTCGA TGAGTTCACC
AAAACCGTCA CCTACGATGC TGCCCGTGGC GAAAGCCGTG GACCACGCAA GCGCAAGGCC
GCCACCGACC TTGGTGACTG CGTGGACTGT AATCTGTGTG TGGAGGTGTG CCCCACCGGC
ATCGATATCC GCAACGGCTT GCAGTATGAG TGCATCAACT GTGGCGCCTG TGTCGATGCC
TGCAATCAGA CCATGGCCAA CTTTGGCTAT AAGCCCGACC TTATCGCCTT CACCAGTGAA
CTGGGCCTCA AGGGTGCGAC GCCGCCCCTT TGGCAGCGCA AACGCTTTAT CGGCTACGGC
CTGGCGCTTG TGGCTATCCT CGCCACCATG GGACTGGACA TGGCGAGTCG CAGCAGTATC
GAGCTCAATG TGCTGCGCGA CCGCCAAAGC CTTTACCGTG AAACCACAGG CGGCCAGATT
GAAAACACCT ATCTGCTTAA AATCCGCAAT AAAACCCAGC AACCCAAGGA GTATCAACTG
TCGGTGACAG GTGCACTGAC GCTGGCAATG TCGAAAACTG AGGTGAGCAT TGCCCCCGGC
GAGCAGGTTG AACTGCCCCT GACACTCACG GCGATGTCTG CAGACATTCA AAGAAGTCGC
ACCAAGCTCA CCGTCACCGT CTCTGAGCTG GTGTCTGAGT CAGGGACTGA TGGGGAGACA
GAGGCCGTCA GTCAGGATTC GGTGTTCTTC GCCCCCTGA
 
Protein sequence
MQQSNQPQQS IPVTFIPSSE EPSAHKEPSA YKEPSAHKEP SAHKKPSANG GPSAPKKPSS 
KTESKSGGKI QFRSQPGLFQ RWRSATGTGL IALFFLLPFI SWHGRQAIWF DLSNQQFYFF
GTSLWPQDFT LLAWVFIAAA FGLFFVTLFW GRVWCGFLCP QTQWTFMFAW VEEKFEGSRN
QRIKLDKAPW SREKLSKRLG KHSSWLLMSL LTGCGFIAYF VPARELYPAI FSFSGGFWDT
AWVWFFAICT YLNAGWMREQ MCLHCCPYAR FQSAMFDEFT KTVTYDAARG ESRGPRKRKA
ATDLGDCVDC NLCVEVCPTG IDIRNGLQYE CINCGACVDA CNQTMANFGY KPDLIAFTSE
LGLKGATPPL WQRKRFIGYG LALVAILATM GLDMASRSSI ELNVLRDRQS LYRETTGGQI
ENTYLLKIRN KTQQPKEYQL SVTGALTLAM SKTEVSIAPG EQVELPLTLT AMSADIQRSR
TKLTVTVSEL VSESGTDGET EAVSQDSVFF AP