| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2833 |
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| Symbol | |
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| ID | 4605080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3369678 |
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| End bp | 3370304 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782244 |
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| Product | amino acid transporter LysE |
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| Protein accession | YP_928705 |
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| Protein GI | 119775965 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.318432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.661514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCA GTGTTTGGCT GGCGCTGCTG GCCGTGTGTT GTTTGGGGGC TATGTCGCCG
GGGCCCAGCC TGGCCATGGT GGTGCGTCAT ACCCTGGGTG GCGGCAGGGG AGCCGGTATT
GCCTGTGCCT GGGCCCACGC TATTGGTATT GGTGTATATG CGCTTATTAC CCTGCTGGGG
CTGGCCCTTG CCATGAAAGA AGCGCCACTG CTGTTTAATG GCATTGCCCT GATTGGTGCC
CTTTACCTGA TGTGGATGGG CTGGGGCGCG CTGAACTCAA AAGGCGGCAT GCAGGACAAA
CTTGCTGCTG GCAAGGCATC TTCACTCAGC GAGGCGGCCC GTGACGGTAT TGCGATATCG
CTATTCAACC CTAAGATTTT GCTGTTTTTT TTGGCGCTCT TTAGTCAGTT TGTGATGGCG
TCTTCCACCA TTGAAGGCAA GGCGATTATC GTGCTCACGC CGCTCATAGT GGATGGTCTC
TGGTACACTA TAGTGGCGCT TTTGCTGTCG CATCCGCGGC TGCTGCCGAA ATTACGGGAG
AAGGCGGCCA TCATCGACAA GCTGTCCGGC GCTATTTTGA TTTTGCTTGG CCTCAGGGTG
ATTTGGACTC TGTGGCAAGG GCTGTGA
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| Protein sequence | MSFSVWLALL AVCCLGAMSP GPSLAMVVRH TLGGGRGAGI ACAWAHAIGI GVYALITLLG
LALAMKEAPL LFNGIALIGA LYLMWMGWGA LNSKGGMQDK LAAGKASSLS EAARDGIAIS
LFNPKILLFF LALFSQFVMA SSTIEGKAII VLTPLIVDGL WYTIVALLLS HPRLLPKLRE
KAAIIDKLSG AILILLGLRV IWTLWQGL
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