| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2831 |
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| Symbol | |
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| ID | 4605078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3368450 |
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| End bp | 3369115 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782242 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_928703 |
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| Protein GI | 119775963 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00406873 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.934783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGTTG CATGTTGGCA GGACTTTATT GCCGCCGAAT CCGAGAAACC TTACTTTAAA
TCTCTCACTG AATTTGTTGC CGCCGAACGC CAAAGTGGCA AAACCATTTT TCCTCCTGAA
GCAGAAGTAT TCGCGGCGTT TGAGCACACG CCATTGGATA AGGTGCGGGT CGTGCTGATT
GGCCAGGACC CATACCATGG TGCCGGGCAG GCCCATGGAC TCTGTTTCTC GGTTAAGCCT
GGTATTAAGC CGCCGCCCTC GCTGGTGAAT ATGTATAAAG AGCTCTCAGC CGATATCCCC
GACTTTGAGA CACCGTCACA CGGGTACTTA CTGCCCTGGG CCAGACAGGG TGTGTTGATG
CTCAACACCG TGCTCACGGT TGAGGAGGGC AAGGCACACT CCCACGCCAA GGCGGGCTGG
GAAACCTTTA CAGCGGCCGC GCTTAAGCTG CTCAATGAGC GTGATACGCC GATTATCTTT
GTGCTTTGGG GCAGCCATGC CATCAAGAAG GGCAAGGGTA TTACTGCGCC TCAGCATCAG
GTGTTGTCGG GTGTGCACCC ATCGCCCTTA TCCGCCTATC GCGGCTTTTT TGGATGCGGC
CACTTTTCGA AAATCAACGA GTTATTGAAA GCACATGGCG GTGAGCCCAT CGACTGGCGC
CTGTAA
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| Protein sequence | MAVACWQDFI AAESEKPYFK SLTEFVAAER QSGKTIFPPE AEVFAAFEHT PLDKVRVVLI
GQDPYHGAGQ AHGLCFSVKP GIKPPPSLVN MYKELSADIP DFETPSHGYL LPWARQGVLM
LNTVLTVEEG KAHSHAKAGW ETFTAAALKL LNERDTPIIF VLWGSHAIKK GKGITAPQHQ
VLSGVHPSPL SAYRGFFGCG HFSKINELLK AHGGEPIDWR L
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