| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2830 |
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| Symbol | |
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| ID | 4605077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3367372 |
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| End bp | 3368373 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782241 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_928702 |
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| Protein GI | 119775962 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000446804 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.601872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTC CTGACAATCA GAGTCTATCT ATGGATTTGA ATGCCATTCG ACAGCTGGCC
GACGCCGATA TGCAGGCAGT TAATCAGCTG ATCTATAAAC AACTGGAATC CGATGTTGCC
CTCATCAACC AGCTGGGCTT TTACATTATT AATGGAGGCG GCAAACGTCT GCGCCCTCTG
TTATCGGTGT TGGCCGCCCG CGCCGTTAAC TATAATGGTG AAGGTCATCT GAAGCTCGCC
GCCATTATCG AGTTTATCCA TACCGCTTCG CTGCTGCACG ACGACGTGGT GGATGAGTCT
ACCTTGCGCC GGGGCCGCGA AACCGCCAAT GCCCTCTTTG GCAACAGCGC CAGTGTATTG
GTGGGTGACT TCCTTTATAC CCGCTCATTC CAGATGATGA CTGAGCTTGG CAGTATGAAG
GTGCTGCAGG TGCTTGCCGA TGCCACCAAC GTGCTGGCCG AAGGGGAAGT GCTGCAGTTG
ATGAACTGCA ACGACCCCAA TACCACCGAA GAAAGCTACA TGCGGGTTAT CTACTGCAAA
ACCGCCAAGC TGTTTGAAGC GGCTACCCGT CTTGCCGCCG TGCTGGCAGG CAGCGATGAA
AAGGTAGAAG AAGCCCTTGC CGACTATGGA AAGTACCTCG GCACGGCCTT CCAGCTGATT
GACGACTTGC TGGACTACAC CAGTGACGCC GAAGAGCTGG GCAAAAACAT CGGTGACGAC
CTTGCCGAAG GTAAGCCTAC CCTGCCACTG ATTTACGCTA TCGGCCATGG TAACGAGCGC
GAGCAAGGCC TCATTCGTAA TGCCATTGAA AAAGCCGATG GCACAGGTGC CATTGAAGAA
ATCCTCACGG CCCTGCATCG CTGTGGTGCG CTTGACTACA CCCGCAGACG CGCTGAAGAA
GAAGCAGACA AAGCCATTGC GGCATTAAGC GTACTGCCGG AAGGTGACTT TAAGACAGCG
CTTGAATCGC TGGCCCGAAT CGCCGTATCC CGCAGCAACT GA
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| Protein sequence | MPSPDNQSLS MDLNAIRQLA DADMQAVNQL IYKQLESDVA LINQLGFYII NGGGKRLRPL
LSVLAARAVN YNGEGHLKLA AIIEFIHTAS LLHDDVVDES TLRRGRETAN ALFGNSASVL
VGDFLYTRSF QMMTELGSMK VLQVLADATN VLAEGEVLQL MNCNDPNTTE ESYMRVIYCK
TAKLFEAATR LAAVLAGSDE KVEEALADYG KYLGTAFQLI DDLLDYTSDA EELGKNIGDD
LAEGKPTLPL IYAIGHGNER EQGLIRNAIE KADGTGAIEE ILTALHRCGA LDYTRRRAEE
EADKAIAALS VLPEGDFKTA LESLARIAVS RSN
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