| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2829 |
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| Symbol | rplU |
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| ID | 4605076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3366806 |
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| End bp | 3367117 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639782240 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_928701 |
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| Protein GI | 119775961 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000650093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.344337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACGCTG TTTTTCAAAG TGGTGGCAAG CAACACCGTG TTGCTGAAGG CCATACTGTA
CGTTTGGAAA AAATCGAAGT TGCTACCGGT GAAACCATCG AGTTCGATCA GGTTCTGTTG
GTTGCTGATG GCGAAAACGT GAAAGTGGGT GCTCCACTGG TTGCTGGCGG CAAAGTAGTT
GCTACTGTTG TTGCTCACGG CCGCGGCGAA AAGGTAACTA TCCAGAAGTT CCGTCGTCGT
AAGCACCACG AGAAGAAGAT GGGCCACCGT CAGTGGTTCA CTGAAGTTAA AATCACTGCT
ATCAACGCTT AA
|
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| Protein sequence | MYAVFQSGGK QHRVAEGHTV RLEKIEVATG ETIEFDQVLL VADGENVKVG APLVAGGKVV
ATVVAHGRGE KVTIQKFRRR KHHEKKMGHR QWFTEVKITA INA
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