| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2827 |
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| Symbol | obgE |
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| ID | 4605074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3365225 |
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| End bp | 3366394 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782238 |
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| Product | GTPase ObgE |
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| Protein accession | YP_928699 |
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| Protein GI | 119775959 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00452464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.232472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG TCGACGAGGC GGTCATTAAG GTTCAGGCCG GTGACGGTGG CAGCGGTTGC
GTAAGCTTTC GCCGTGAAAA ATACATTCCC GATGGTGGTC CCGATGGGGG CGACGGTGGC
GATGGCGGCA GTGTGTATCT GGTGGCCGAC GCCAGCCTCA ATACCCTGAT TGATTACCGC
TTTGAGCGTT TTTACCTTGC TGAGCGTGGT GAAAACGGTC GTGGTCGTGA CTGCACCGGT
AAAGGTGGCA GCGATCTGAC CCTGCGTGTT CCCGTAGGTA CCCGTGCCGT AGACATAGAT
ACCGACGAAG TGCTGGGTGA TTTGACCGAA GTCGGTCAAA AACTGTTGGT GGCCAAGGGT
GGATTCCACG GTTTGGGTAA CACCCGTTTT AAAAGCAGTG TAAACCGTGC TCCACGCCAG
AAAACCCTGG GTACCAAGGG TGAGGTTCGT GAGCTGCGCC TCGAGCTGTT GCTGCTGGCG
GATGTGGGTC TGCTGGGGAT GCCAAACGCC GGTAAATCAA CCTTCATTCG CGCAGTTTCC
CGTGCGACAC CCAAGGTGGC TGATTATCCC TTTACCACTC TGGTGCCAAA CCTTGGCGTA
GTGAACCCGC GCCCCGGTCA GAGCTTTGTC ATTGCCGACA TTCCGGGTTT GATTGAAGGC
GCCGCCGAAG GTGCCGGCCT GGGTATTCGC TTCTTGAAGC ACCTGGAACG TTGCCGCGTG
CTGCTGCACA TTTTGGATAT CGAGCCCATC GATGGCTCAA GCCCTGCTGA AAGCGCCCGC
GCTATTGTTG CCGAGCTTGA AAAGTATTCA CCTGAACTGG CTGCCAAGCC CCGCTGGTTG
GTATTCAACA AAACCGACCT GCTGCTTGAA GAAGAATTGC AGGAACGTGT TGATGCCATT
GTGGCTGAGC TTGGCTGGGA AGGCGATGTG TACACCATGT CTGCCGCGAC CCGTGAGGGT
ACCAAAGAGC TGGCTGAAAA GCTGTTCGAC TTCATCAAGA GCTTGCCAGA TGAAGCCGCT
GCCGCCGATC CTGACAAGGA AGTGGAGTTC AAGTGGGACA ATTACCACAA GGCTCAGCTA
GACGATCTGA ACCCGGATTT TGATGATTCG GATGATGACG ATGATTTCGA TGATGACGAC
TACGACGTGG AAGTCATTTA CCAGAGATAA
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| Protein sequence | MKFVDEAVIK VQAGDGGSGC VSFRREKYIP DGGPDGGDGG DGGSVYLVAD ASLNTLIDYR
FERFYLAERG ENGRGRDCTG KGGSDLTLRV PVGTRAVDID TDEVLGDLTE VGQKLLVAKG
GFHGLGNTRF KSSVNRAPRQ KTLGTKGEVR ELRLELLLLA DVGLLGMPNA GKSTFIRAVS
RATPKVADYP FTTLVPNLGV VNPRPGQSFV IADIPGLIEG AAEGAGLGIR FLKHLERCRV
LLHILDIEPI DGSSPAESAR AIVAELEKYS PELAAKPRWL VFNKTDLLLE EELQERVDAI
VAELGWEGDV YTMSAATREG TKELAEKLFD FIKSLPDEAA AADPDKEVEF KWDNYHKAQL
DDLNPDFDDS DDDDDFDDDD YDVEVIYQR
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