Gene Sama_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2824 
Symbol 
ID4605071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3363472 
End bp3363954 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content50% 
IMG OID639782235 
Productdihydrofolate reductase 
Protein accessionYP_928696 
Protein GI119775956 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.545858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG CCATGATTGC CGCGATGGCC AATAACCGGG TGATAGGAAA AGATAACCAA 
ATGCCCTGGC ATTTGCCGGA AGATCTCAAG CATTTCAAGG CTATGACGCT GGGCAAACCC
GTGGTGATGG GCCGTAAAAC CTTCGAATCC ATAGGTCGTC CATTGCCCGG GCGTCACAAT
ATTGTGATTT CACGCCAGAG TGACTACTCC CACGAAGGTA TTAGTCTGGT GTCTTCATTT
GAAGAAGCCG TGGCGCTGGC CGGTGATTGT GAGGAGTTGG TGGTTATCGG TGGTGGGCAA
CTCTATCAAA CCCTGATTTC CCAGGCAGAT AAGCTATATT TAACCGAGAT AGCCTTGGAG
GTTGAGGGGG ATACCCACTT CCCAGCCTGG GATGATGGCA GCTGGGAAAC GGTTGAATCC
ACTGAACATG TGTCAGACAA AGGCCTTCAA TATCGCTTTA TCACCTTGGT AAAAAAGTGT
TAA
 
Protein sequence
MRIAMIAAMA NNRVIGKDNQ MPWHLPEDLK HFKAMTLGKP VVMGRKTFES IGRPLPGRHN 
IVISRQSDYS HEGISLVSSF EEAVALAGDC EELVVIGGGQ LYQTLISQAD KLYLTEIALE
VEGDTHFPAW DDGSWETVES TEHVSDKGLQ YRFITLVKKC