Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2811 |
Symbol | |
ID | 4605058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3349618 |
End bp | 3350571 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639782222 |
Product | glycerate dehydrogenase |
Protein accession | YP_928683 |
Protein GI | 119775943 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.119851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.62617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAA TTTGTGTATT GGATGGCTTC ACCCTTAACC CCGGCGATCT GGATTGGTCG CCCCTGGCTG ATATTGGCCC CTTCGACGTC CATGACAGGA CACCGAAAGA GCTTATCCTG AGCAGGGCCG CCGGCGCCCG GTTTTTACTG ACCAATAAAA CCGTGCTCGA TGCCGCCACC CTCGAGGCTA TGCCTTCGCT GGAATACATA GGGGTGCTGG CAACGGGGAC CAATGTGGTG GATGTGGCGG CCGCAAAACG TCTGGGGATA GCCGTGACCA ATGTGCCCGG TTATGGCCCG GATGCGGTGG CGCAAATGGG CTTTGCCCAT GTGCTGCATC ATATGTCCCG GGTCAGCGCC CATCATGATG CGGTGACCCA GGGGCAATGG AGCGGGCAGG CCGACTTTTG CTTTACCCTT GGGCAGTTGG AGTCATTGTC AGGCAAGACC TTGGGCCTGG TGGGCTTTGG CGACATTGCG CGGCAAATGG CGCGTATCGG TATGGCCTTT GGTATGAAGT TGCTGGTACA CAGCCGCAGT AAACCCACGG ATTTACCGGA GGGAGCCAAG TTTGTTGCGC TGGACACCCT GTTTGCCGAA TCCGATGTGT TATCGCTCCA TTGCCCGCTG ACCGACGATA CCCGGGACAT GGTCAATCGC GAAAGCCTGG CGCTCATGAA ACAGGGGGCC TTACTTATCA ATACCGCCCG TGGCGGTCTG GTGGATGAAG TGGCTCTGGC GGATGCGCTC AATGCCGGAC GCGTCAGGGC TGGAGTCGAT GTGCTCTCAA CCGAGCCGCC GGCTCCAAAT AACCCGCTGC TCCATGCCGC CAATATCAGC ATCACTCCCC ATAATGCCTG GGCTACCGTG AAGGCGAGGC AGAAGCTGCT GGATATTGCG GTTGAAAACC TCAGGGCATT CAGCCGTGGT GAAAGCGTAA ACCGGGTCGA TTGA
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Protein sequence | MTAICVLDGF TLNPGDLDWS PLADIGPFDV HDRTPKELIL SRAAGARFLL TNKTVLDAAT LEAMPSLEYI GVLATGTNVV DVAAAKRLGI AVTNVPGYGP DAVAQMGFAH VLHHMSRVSA HHDAVTQGQW SGQADFCFTL GQLESLSGKT LGLVGFGDIA RQMARIGMAF GMKLLVHSRS KPTDLPEGAK FVALDTLFAE SDVLSLHCPL TDDTRDMVNR ESLALMKQGA LLINTARGGL VDEVALADAL NAGRVRAGVD VLSTEPPAPN NPLLHAANIS ITPHNAWATV KARQKLLDIA VENLRAFSRG ESVNRVD
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