| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2805 |
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| Symbol | |
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| ID | 4605052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3344416 |
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| End bp | 3345561 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782216 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_928677 |
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| Protein GI | 119775937 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.743395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAC TGCTTATCCT GACCTACGCC GCCATCTGTG TGGTGATATT TAAAGTCTTC
AAAATCCCCC TCAACAAATG GACAGTACCC ACAGCGGTAT TGGGCGGCAT AGTGCTTTTG
GGCACCTTGT TGCTGCTGAT GAATTACAAC CATCCCTACA GCCGCTTTGC CCGCGAGTAT
TTTGTAACCG TGCCCATTAA TCCTTTGGTC ACCGGCAAGG TGGTGGAAGT GGCCGTGATG
CCCAATGTAC CTATTCGTGA AGGCGAGGTG CTGTTTCGGC TGGACCCCAG ACCCTTTGAG
TCAGCGCTTA TCCAAAAGCA GGCGGCATTG AAAGCGGCGG AGCAGGAAGT GCCTCAGCTT
GAGGCCGCGT GGGAAACCGC CAGGGCCAGT GTTGAGCGTG CTCAGGCCGA CAGAGACAGA
AGCAAGTCTG AGTACGAGCG TTACGAAGCC GGTCGTCGCA AGGGGGGAGC CAACTCGCCT
TTTACTGCCC TCGAACTGGA TAACAAGCGT CAGCTCTACT TTGCTGCCGA AGCCCAGCTC
ACCGCCGCCA GGGCCGAGGA AATGCGGGTT CGCTATGCCT ATGAGTCCAA TATCGATGGG
GTGAATACCA AGGTGGCCGC GGCCAGGGCC GAAGTTGCCA AGGCCGAGTT TGACCTGGAA
CAATCTGTGG TGCGTGCACC CACAGATGGC GTTGTCACTC ACATGGCCCT GCGTCCAGGT
ATGGTGGTGG TACCCATGCC GCTCAGGCCG GTGATGAGCT TCATTCCCAA TGAACAGCGT
TATTTTGTGG GCGCGTTTTG GCAAAACTCC ATGCTGAGGC TCAAGGCCGG TGACCAAGCC
GAGGTGATAC TGGATGCGGC TCCCGGACAG GTGTTTAAAG GCCGGGTTGC CCGGGTTCTA
CCCGCCATGG CCGAGGGCGA GGTGCAGGCC AACGGTCAGC TGCAATCCTC CGCCAGAATG
TTCCAGCGGG GCAGGGTGTT GGTGATGATT GAGTTTGACC GCTCCGACGA GATTCAGGCT
TTTCCGGCCG GGGTCGCAGG TCAGGTGGCC ATCTACACAG ATCACTTCTC CCATGTTGCC
GTGATGCGAA AAGTGCTGCT GAGAATGCAG GGCTGGCTTA ACTACCTCTT CGGCGAGGGG
CACTAG
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| Protein sequence | MDLLLILTYA AICVVIFKVF KIPLNKWTVP TAVLGGIVLL GTLLLLMNYN HPYSRFAREY
FVTVPINPLV TGKVVEVAVM PNVPIREGEV LFRLDPRPFE SALIQKQAAL KAAEQEVPQL
EAAWETARAS VERAQADRDR SKSEYERYEA GRRKGGANSP FTALELDNKR QLYFAAEAQL
TAARAEEMRV RYAYESNIDG VNTKVAAARA EVAKAEFDLE QSVVRAPTDG VVTHMALRPG
MVVVPMPLRP VMSFIPNEQR YFVGAFWQNS MLRLKAGDQA EVILDAAPGQ VFKGRVARVL
PAMAEGEVQA NGQLQSSARM FQRGRVLVMI EFDRSDEIQA FPAGVAGQVA IYTDHFSHVA
VMRKVLLRMQ GWLNYLFGEG H
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