| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2798 |
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| Symbol | |
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| ID | 4605045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3338415 |
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| End bp | 3339299 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639782209 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_928670 |
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| Protein GI | 119775930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3713] Outer membrane protein V |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0453163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCC AGATTGCCAC CCAAATGAAG TCATCCTTTT TTGGTTTTTT ACTCAGTGTC
TTGCTCCTGT CACCCTCCAT GGTGATGGCG CAGTGTGACG ACACCACAGA CTGCATCGAA
AAAGGCAGTT GGGATCTGGG CATTGCCTTT GGCTATGGCC AAAGAACCAA TCCGCTTAAA
GATTACGAAG ACATCCCCAT CTATGTGCTG CCCACCATCG CCTATTATGG CGACAGCTGG
TTTTTTGATA ATGGCGCCAT AGGTTACACC CTGACGGAGC AAGAGCGCTT TACTGTCAAT
TTGATCACTG GCTTCTCCAG TGACAGGGCC TTTTTCTATC GCTGGGATCC TTCCAATATC
TTCCTGGCCG GTACCTCCCG TGGGTTCAGA GAGGCAGAGC TGAGCGGTAT CACCAGTTTT
GCGACCCTGG ATACCATAGG CGAGCTGGAG TCACGTAACT TTACATACCT CGGCGGTATT
GAGGCCTATG TCTACAACCG TTTTGGCACC TTACGGCTGG CCCTGCTCCA TGATCTCCTG
AACGTGCATC AGGGCACTGA AGGCCAAATC AAGTGGAACT ACCATTGGGG TCATAAAGAG
TTAAGTGTTG ATTTTGCGGT ATTCTTTGAC TGGAAGAGTC AGGAAGTCGT TAACTATTAC
TATGGCGTAC GCCCATCGGA AAGTGCATAC TGGCATGAGC ATTACCGCAC AGAAAACGGC
TGGAACCGTG GGCTCGAACT CACAGCCCGT TACAGCCTAA CACCTGCATG GGAACTCCTG
ATGACGGCTC GCTACACCCA ACTCGCCGAT ACCATAGCGC AAAGCCCCCT ATTGGACGAA
GACGACAGCT ACGCCTACCT GATTGGCGCA GCCTATAGGT TCTGA
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| Protein sequence | MEPQIATQMK SSFFGFLLSV LLLSPSMVMA QCDDTTDCIE KGSWDLGIAF GYGQRTNPLK
DYEDIPIYVL PTIAYYGDSW FFDNGAIGYT LTEQERFTVN LITGFSSDRA FFYRWDPSNI
FLAGTSRGFR EAELSGITSF ATLDTIGELE SRNFTYLGGI EAYVYNRFGT LRLALLHDLL
NVHQGTEGQI KWNYHWGHKE LSVDFAVFFD WKSQEVVNYY YGVRPSESAY WHEHYRTENG
WNRGLELTAR YSLTPAWELL MTARYTQLAD TIAQSPLLDE DDSYAYLIGA AYRF
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