Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2781 |
Symbol | |
ID | 4605028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3323531 |
End bp | 3324292 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639782192 |
Product | hypothetical protein |
Protein accession | YP_928653 |
Protein GI | 119775913 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.925085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAAG TAAAAATAGG ATTGATGCTT CCTGGAGCTA CATTCTTTAA TGATCATAAT GTAAACCCTA CATGGAAAGG TCATGTTAAA ACACATGATT CAGTAGTGGT TGCATATGTA AAAAAAGTTA CAGTTCAAGA GCTTTATGCC GAATGTGTAT GCGCTGTAAT AGGTCGTTCA CTTGGATTAT CCATTCCAAA ACCTATTATT GTTAAGGTTA CGCATACCGT TTTTGAAGAA ATTCCTGAAG GTGAATATGC TTTAGCATTT GGATCTGAAG ATGCAGGTTA TCCAAGTTTT CGAAGGTACT CCAAAAGTGA AGAGGCATTA GAAAAGCTCA AAAACTACTC AAGAGTATTA GATATTGGTG TTTTTGATGA GTGGATCGCC AACTGGGACA GAAATGTAGG AAACATACTT TATGATGGCG GTGATAAATT TTCTTTCATA GACCATGAAA ATGCTTTGGA CCTATCTTTA GATGAAAGTG ACTCAGCTAA AGATAACCAA ATCATTAGAG TTATATATTC ATTAAAAAGT GAATTTGAGA AACATAAAAT TATTAGAGAT ATTGACGTAG GAATAACTCG CCAGTACAAA GAGTTTCCTT TTTCTCTGAT TTCAGAAAAA ACCTATGCCA GTTCTTACTT ATCCCAAGAG CAGATTATAA AGGTTATAGG GTTTCTTGAG AAAAGAACTG AGCACATTAA AATATTAATG AATCGAAGAC TGGGAATTCA ACAACAGGAG ATGGCGTTAT GA
|
Protein sequence | MEQVKIGLML PGATFFNDHN VNPTWKGHVK THDSVVVAYV KKVTVQELYA ECVCAVIGRS LGLSIPKPII VKVTHTVFEE IPEGEYALAF GSEDAGYPSF RRYSKSEEAL EKLKNYSRVL DIGVFDEWIA NWDRNVGNIL YDGGDKFSFI DHENALDLSL DESDSAKDNQ IIRVIYSLKS EFEKHKIIRD IDVGITRQYK EFPFSLISEK TYASSYLSQE QIIKVIGFLE KRTEHIKILM NRRLGIQQQE MAL
|
| |