Gene Sama_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2781 
Symbol 
ID4605028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3323531 
End bp3324292 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content35% 
IMG OID639782192 
Producthypothetical protein 
Protein accessionYP_928653 
Protein GI119775913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.925085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAG TAAAAATAGG ATTGATGCTT CCTGGAGCTA CATTCTTTAA TGATCATAAT 
GTAAACCCTA CATGGAAAGG TCATGTTAAA ACACATGATT CAGTAGTGGT TGCATATGTA
AAAAAAGTTA CAGTTCAAGA GCTTTATGCC GAATGTGTAT GCGCTGTAAT AGGTCGTTCA
CTTGGATTAT CCATTCCAAA ACCTATTATT GTTAAGGTTA CGCATACCGT TTTTGAAGAA
ATTCCTGAAG GTGAATATGC TTTAGCATTT GGATCTGAAG ATGCAGGTTA TCCAAGTTTT
CGAAGGTACT CCAAAAGTGA AGAGGCATTA GAAAAGCTCA AAAACTACTC AAGAGTATTA
GATATTGGTG TTTTTGATGA GTGGATCGCC AACTGGGACA GAAATGTAGG AAACATACTT
TATGATGGCG GTGATAAATT TTCTTTCATA GACCATGAAA ATGCTTTGGA CCTATCTTTA
GATGAAAGTG ACTCAGCTAA AGATAACCAA ATCATTAGAG TTATATATTC ATTAAAAAGT
GAATTTGAGA AACATAAAAT TATTAGAGAT ATTGACGTAG GAATAACTCG CCAGTACAAA
GAGTTTCCTT TTTCTCTGAT TTCAGAAAAA ACCTATGCCA GTTCTTACTT ATCCCAAGAG
CAGATTATAA AGGTTATAGG GTTTCTTGAG AAAAGAACTG AGCACATTAA AATATTAATG
AATCGAAGAC TGGGAATTCA ACAACAGGAG ATGGCGTTAT GA
 
Protein sequence
MEQVKIGLML PGATFFNDHN VNPTWKGHVK THDSVVVAYV KKVTVQELYA ECVCAVIGRS 
LGLSIPKPII VKVTHTVFEE IPEGEYALAF GSEDAGYPSF RRYSKSEEAL EKLKNYSRVL
DIGVFDEWIA NWDRNVGNIL YDGGDKFSFI DHENALDLSL DESDSAKDNQ IIRVIYSLKS
EFEKHKIIRD IDVGITRQYK EFPFSLISEK TYASSYLSQE QIIKVIGFLE KRTEHIKILM
NRRLGIQQQE MAL