Gene Sama_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2774 
Symbol 
ID4605021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3316862 
End bp3317425 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID639782185 
ProductNTPase 
Protein accessionYP_928646 
Protein GI119775906 
COG category[S] Function unknown 
COG ID[COG1986] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00258] inosine/xanthosine triphosphatase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0124832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAA TAATTAACAC AATGACATTA ACAAACATCA AGGTGCTGGT GGGCTCCAAA 
AACCCTATCA AGGTTGCCGC CGCCAAAGGC GCCATCGAGG CTTTGTACCC CCAGGCCGAC
GTCGAATGCC ATGGCGTTTC CGTGCCATCC GGCGTACCGG ACCAGCCCAT GAATACCGCC
GACACCCGCC TGGGTGCCAT CAACCGTGCC AAGGCCTGTC ATGAACTGGG CAACGCCCAC
TTCTATATCG CCATGGAAGG TGGCGTGGAC GAGTTGGAAG ACGGACCGGC CACCTTTGCC
TACGTAGCCA TAGTCACAGA GTCGGGTGAG ATGTCGGTGG GCAGAAGCAG CCAGCTACCC
TTGCCAAAGC AGATTTATGC CGCCCTTCAG GCCGGTGAAG AATTGGGACA TGTGATGGAC
AGAATGTTCA ATACTGTGAA CATCAAACAG GATGTGGGTG CCATCGGCTT ACTGACCCAC
AACGCCGAGA GTCGTGGCAG CAGTTACCGT CAGGCCCTGA TCCTCGCCAT GGCACCACTG
CTGCACCCCG AGCTGTATCG ATAA
 
Protein sequence
MLEIINTMTL TNIKVLVGSK NPIKVAAAKG AIEALYPQAD VECHGVSVPS GVPDQPMNTA 
DTRLGAINRA KACHELGNAH FYIAMEGGVD ELEDGPATFA YVAIVTESGE MSVGRSSQLP
LPKQIYAALQ AGEELGHVMD RMFNTVNIKQ DVGAIGLLTH NAESRGSSYR QALILAMAPL
LHPELYR