Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2772 |
Symbol | |
ID | 4605019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3312408 |
End bp | 3313724 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639782183 |
Product | amino acid transporter, transmembrane |
Protein accession | YP_928644 |
Protein GI | 119775904 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACG AAACCATCAC AGCCCCTGCC ACCCAGGCAA GCATCTCTTC CACCGTTTCA CAGCCCCACA AAGCCACGCC CAACAATGCC ATGCCCTGGA CGGCGCAGGA TACCACCTGG ATGCTGAGCC TGTTTGGCAC CGCCGTGGGC GCAGGCATTT TATTTTTGCC CATTAATGCC GGTATGGGAG GCTTCTGGCC ACTGGTGGTG ATGGCGCTTT TGATTGGTCC CATGACGTAT CTCGCCCACC GGGGGCTGTC GCGTTTTGTG TGCTCTTCAT CCATTGCCGG AAGCGATATC ACCCAGGTGG TGGAAGAGCA TTTTGGCAAG GGCGCAGGTA AAGCCATTAC TGTGCTGTAT TTCTTCGCAA TTTATCCCAT AGTGCTCATC TATGGTGTGG GCATTACCAA TGTGGTCGAC AGCTTTATGG TCAACCAGCT TGGCTTGGAG TCGCTGCCGC GCTGGCTGCT TTCGGGCGTA CTTATCCTCG GCATGATGTC GGTGATGGTG GCCGGTGAAA AGATAATGCT CAAGGTGACC CAGTTTTTGG TGTACCCCCT GGTGGCGATT CTTGCCTTTA TGTCGCTGTA CCTGATGCCT AACTGGAACC TGGCCGCCGT AAAGGAGGTC CCTGCCGTTG GTGACTTCCT CGGCACCATC TGGCTGACTA TTCCCGTGCT CATTTTTGCG TTTAACCACT CGCCCGCCAT CAGTCAGTTT GCGGTATCAC TTAAGCGCGA CCATGGCAGC AATGCGTCCC GCAAGGCCGA TATCATCCTG CGCAACACCG CCATGATGCT GGTGGGCTTT GTGATGCTGT TTGTGTTCTC CTGCGTGCTG TCGTTAAGCC CGGCGCAGCT GGCCGAGGCC AAGAGCCAGA ACCTGCCGAT TCTGTCGTAC CTCGCCAACG TGTTCGACAG TGGTTTTGTC AGCTACTTTG GCCCCTTCAT TGCCTTCGTG GCCATAGTGT CTTCCTTCTT CGGCCACTAC ATGGGCGCCA GCGAAGGTAT GAGCGGCATT ATCAAGAAGC AGCTTGAAGG TAAAGGTAAA CCAGTGGATG AAGGCAAACT GAACCGCTTT ATTCTGGGCT TTATGTTCCT GACCATCTGG GCGGTTGCCG TGATTAATCC CAGTATCCTC GGCATGATTG AAGCCCTCGG TGGCCCCATC ATTGCCGCCA TCCTGTACCT GATGCCCATG TACGCCGTGT ATCGGGTGCC AGCGCTCAAA GCCTACCGTG GCCGCATCAG CAATATCTTC GTGATCATTG CCGGTTTACT GTCGATGACA GCCATCCTCT ACGGGCTGAC CGCCTGA
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Protein sequence | MSNETITAPA TQASISSTVS QPHKATPNNA MPWTAQDTTW MLSLFGTAVG AGILFLPINA GMGGFWPLVV MALLIGPMTY LAHRGLSRFV CSSSIAGSDI TQVVEEHFGK GAGKAITVLY FFAIYPIVLI YGVGITNVVD SFMVNQLGLE SLPRWLLSGV LILGMMSVMV AGEKIMLKVT QFLVYPLVAI LAFMSLYLMP NWNLAAVKEV PAVGDFLGTI WLTIPVLIFA FNHSPAISQF AVSLKRDHGS NASRKADIIL RNTAMMLVGF VMLFVFSCVL SLSPAQLAEA KSQNLPILSY LANVFDSGFV SYFGPFIAFV AIVSSFFGHY MGASEGMSGI IKKQLEGKGK PVDEGKLNRF ILGFMFLTIW AVAVINPSIL GMIEALGGPI IAAILYLMPM YAVYRVPALK AYRGRISNIF VIIAGLLSMT AILYGLTA
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