Gene Sama_2772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2772 
Symbol 
ID4605019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3312408 
End bp3313724 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content55% 
IMG OID639782183 
Productamino acid transporter, transmembrane 
Protein accessionYP_928644 
Protein GI119775904 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG AAACCATCAC AGCCCCTGCC ACCCAGGCAA GCATCTCTTC CACCGTTTCA 
CAGCCCCACA AAGCCACGCC CAACAATGCC ATGCCCTGGA CGGCGCAGGA TACCACCTGG
ATGCTGAGCC TGTTTGGCAC CGCCGTGGGC GCAGGCATTT TATTTTTGCC CATTAATGCC
GGTATGGGAG GCTTCTGGCC ACTGGTGGTG ATGGCGCTTT TGATTGGTCC CATGACGTAT
CTCGCCCACC GGGGGCTGTC GCGTTTTGTG TGCTCTTCAT CCATTGCCGG AAGCGATATC
ACCCAGGTGG TGGAAGAGCA TTTTGGCAAG GGCGCAGGTA AAGCCATTAC TGTGCTGTAT
TTCTTCGCAA TTTATCCCAT AGTGCTCATC TATGGTGTGG GCATTACCAA TGTGGTCGAC
AGCTTTATGG TCAACCAGCT TGGCTTGGAG TCGCTGCCGC GCTGGCTGCT TTCGGGCGTA
CTTATCCTCG GCATGATGTC GGTGATGGTG GCCGGTGAAA AGATAATGCT CAAGGTGACC
CAGTTTTTGG TGTACCCCCT GGTGGCGATT CTTGCCTTTA TGTCGCTGTA CCTGATGCCT
AACTGGAACC TGGCCGCCGT AAAGGAGGTC CCTGCCGTTG GTGACTTCCT CGGCACCATC
TGGCTGACTA TTCCCGTGCT CATTTTTGCG TTTAACCACT CGCCCGCCAT CAGTCAGTTT
GCGGTATCAC TTAAGCGCGA CCATGGCAGC AATGCGTCCC GCAAGGCCGA TATCATCCTG
CGCAACACCG CCATGATGCT GGTGGGCTTT GTGATGCTGT TTGTGTTCTC CTGCGTGCTG
TCGTTAAGCC CGGCGCAGCT GGCCGAGGCC AAGAGCCAGA ACCTGCCGAT TCTGTCGTAC
CTCGCCAACG TGTTCGACAG TGGTTTTGTC AGCTACTTTG GCCCCTTCAT TGCCTTCGTG
GCCATAGTGT CTTCCTTCTT CGGCCACTAC ATGGGCGCCA GCGAAGGTAT GAGCGGCATT
ATCAAGAAGC AGCTTGAAGG TAAAGGTAAA CCAGTGGATG AAGGCAAACT GAACCGCTTT
ATTCTGGGCT TTATGTTCCT GACCATCTGG GCGGTTGCCG TGATTAATCC CAGTATCCTC
GGCATGATTG AAGCCCTCGG TGGCCCCATC ATTGCCGCCA TCCTGTACCT GATGCCCATG
TACGCCGTGT ATCGGGTGCC AGCGCTCAAA GCCTACCGTG GCCGCATCAG CAATATCTTC
GTGATCATTG CCGGTTTACT GTCGATGACA GCCATCCTCT ACGGGCTGAC CGCCTGA
 
Protein sequence
MSNETITAPA TQASISSTVS QPHKATPNNA MPWTAQDTTW MLSLFGTAVG AGILFLPINA 
GMGGFWPLVV MALLIGPMTY LAHRGLSRFV CSSSIAGSDI TQVVEEHFGK GAGKAITVLY
FFAIYPIVLI YGVGITNVVD SFMVNQLGLE SLPRWLLSGV LILGMMSVMV AGEKIMLKVT
QFLVYPLVAI LAFMSLYLMP NWNLAAVKEV PAVGDFLGTI WLTIPVLIFA FNHSPAISQF
AVSLKRDHGS NASRKADIIL RNTAMMLVGF VMLFVFSCVL SLSPAQLAEA KSQNLPILSY
LANVFDSGFV SYFGPFIAFV AIVSSFFGHY MGASEGMSGI IKKQLEGKGK PVDEGKLNRF
ILGFMFLTIW AVAVINPSIL GMIEALGGPI IAAILYLMPM YAVYRVPALK AYRGRISNIF
VIIAGLLSMT AILYGLTA