| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2764 |
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| Symbol | |
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| ID | 4605011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3305629 |
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| End bp | 3306606 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782175 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_928636 |
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| Protein GI | 119775896 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCTG AAACCATCAA CCCCCATGCA AGCCTGCTGG AGTCCGACAG CCCCCAGGTT
AATCTGGTTC GTTGGATGCA TCAGTGTGAG CTTATCAAGC GCTATTACGA AGCCGACTAT
GTATTTGTGG TGCAGAGAGT GTCGCTTGGC TTTGAGGTGC TCGTCAGTGC CATCGCCGAC
CTGCCACACT TTACGTCAGG GCAGATGTTT GACCGGGACA CGCCGTTGTT TCTGGATTTG
GTCAATGCCA TGCCCGATGG TGTGTCACTG GATTTATCCA AATACCATGC AGGTGACTTA
CCCACCGATT TTGACAGCTG TCTTGGGCTG CTTGCCCGGC CCATTCTCTG GCCCGATGGT
TCTGTCTTTG GCTGTTTGTG CGTACTCTCC CACAAGCGGG TAGAAAACCA GAGCATTAAC
AGCTTGATGT TGGAACCGTT TCAGATCCTG TTGCAGCAAG ATCTGGCGTT GCTGTGCCAA
AGTCACAGGG TGGAATCCCT GTCAATGCGG GATAGGGAAA CCGGCATGTT AAACCACTAC
GGTTTTATCA TGATGGCGCC ACGGCAATTA AATCTTGGCC GCCGATTCGG CGCCCATGCC
GGCATTCTGT TTTTTGAGTT GCAGCAACCA GGCCCCGACG CTGATCTCAA CGAAAAACAT
CATCGCCTGC TCGGCGGCAT CATACAGCAC ACCATTCGCA CCGCCGACAT TGCTGCCCAT
TACAGTGATA CCCTGTTTGT GGTGCTGGCA TTTTTGGACA ATGAACGGGA TCTTAACCAT
ATAGTGCAGC GGGTTGAACG CCAACTGGCC CAGCAGGAGC CCAGCCTTAA ACTGGATTAC
AGTTTTCGGT TTTTCTCGCC CGATTCAGGC AGCAAGCTCG GCCCCATGCT GATGTTGGCC
AAAGAAAACC TGCAATCCTG GCAGCAAGAG CAAAAGGCAA AGGCCGCAGA AATGCAATTA
GCGACACCGA CGCTGTGA
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| Protein sequence | MLPETINPHA SLLESDSPQV NLVRWMHQCE LIKRYYEADY VFVVQRVSLG FEVLVSAIAD
LPHFTSGQMF DRDTPLFLDL VNAMPDGVSL DLSKYHAGDL PTDFDSCLGL LARPILWPDG
SVFGCLCVLS HKRVENQSIN SLMLEPFQIL LQQDLALLCQ SHRVESLSMR DRETGMLNHY
GFIMMAPRQL NLGRRFGAHA GILFFELQQP GPDADLNEKH HRLLGGIIQH TIRTADIAAH
YSDTLFVVLA FLDNERDLNH IVQRVERQLA QQEPSLKLDY SFRFFSPDSG SKLGPMLMLA
KENLQSWQQE QKAKAAEMQL ATPTL
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