| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2759 |
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| Symbol | |
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| ID | 4605006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3298852 |
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| End bp | 3300843 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782170 |
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| Product | transketolase |
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| Protein accession | YP_928631 |
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| Protein GI | 119775891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGTA AAGAACTCGC CAACGCTATC CGCGCACTCA GCATGGACGC CGTTCAAAAG
GCCAACTCCG GTCACCCCGG TGCCCCCATG GGGATGGCAG ATATTGCCGA AGTCCTTTGG
CGCGGTCATC TGAAGCACAA CCCCACCAAT CCACAGTGGG CCGATCGCGA CCGTTTCATC
CTCTCCAATG GCCACGGCTC CATGCTGCAC TATTCGCTGC TGCACCTGGC CGGTTATGAC
CTGTCTATTG AAGACCTCAA GCAGTTCCGT CAGTTGCACT CACGCACCCC AGGTCACCCT
GAGTACGGTT ATGCCCCCGG TATCGAAACC ACCACAGGCC CTCTGGGTCA GGGCATCACC
AACGGCGTGG GTATGGCCAT TGCTGAGAAA GTGCTGGCTG CCCAGTTTAA CCGTGACGGT
CACGACATCG TTGACCACTA CACCTACGTG TTCATGGGCG ATGGCTGCTT GATGGAAGGT
ATTTCCCACG AGGCTTGCTC TTTGGCAGGT ACCCTGGGTC TGGGCAAACT GATTGCTTTC
TGGGATGACA ACGGCATCTC TATCGACGGT CACGTTGAAG GCTGGTTTAC CGACGACACG
CCAAAGCGTT TCGAATCTTA CGGCTGGCAT GTAATTGCCG GTGTTGACGG CCACGATGCC
GACGCCATCG ACGCGGCCAT CAAGGCGGCC AAGGCCGACC CACGTCCAAC CCTGATTTGC
TGCAAAACCA TCATTGGTTA CGGCTCGCCA AACAAGTCCG GTTCACACGA CTGCCACGGC
GCGCCGCTGG GCGATGCTGA AATCGCTGCC GCCCGTGAAT TCCTCGGCTG GAAACACGAC
CCATTCGTTA TTCCTGCTGA TATTTATGCC CAGTGGGATG CCAAAGAAGC CGGTATTGCC
TCTGAGAAAG CCTGGGACGA AAAGTTTGCC GCCTACGCCG CTGCTTACCC AGAGCTGGCT
GCTGAATACC AGCGCCGCGT GAAGGGTGAA CTGCCTGCCA ACTTCGCTAC CGAAGCCCAG
GCCTACATCG AGAAGCTGCA GAACAACCCT GCCAACATCG CTTCCCGTAA AGCCTCGCAA
AATGCTCTGG AAGCCTTCGG CGCCATGCTG CCTGAATTCC TCGGCGGCAG TGCTGACCTG
GCCCCATCCA ACCTGACCAT GTACTCGGCT TCCAAATCCA TCACAGGTGC TGATGCCAGT
GGTAACTACC TGCACTATGG TGTGCGCGAG TTCGGTATGA CCGCCATCAT CAACGGTATC
GCGCTGCACG GCGGCTTTGT GCCATACGGC GCCACCTTCC TGATGTTTAT GGAATATGCC
CGTAACGCCA TGCGTATGGC TGCCCTGATG AAGGTGCAGA ACATCCAGGT TTACACCCAC
GACTCTATCG GTCTGGGTGA AGACGGCCCG ACTCACCAGC CAGTAGAGCA AATCGCTTCT
CTGCGCGTGA CCCCGAACAT GAGCACCTGG CGCCCATGTG ACCAGGTGGA ATCAGCCGTG
GCCTGGAAAT ACGCCATCGA GCGCAAAGAC GGCCCAACGT CGCTGATCTT CTCCCGTCAG
AACCTGGCGC AAATGCCACG CAGCGCTGAG CAGCTGGCCA ATGTCGCCAA GGGCGGTTAT
GTGCTGGTAG ACAGCGCTGC AGCCCCTGAA CTCATCATCA TTGCCACCGG CTCTGAAGTT
GAGCTGGCAG TGAAAGCCCA GGCCGAGCTG ACCGCCAAGG GCAAGCAGGT GCGCGTGGTG
TCCATGCCAT CTACCGACGT GTTCGACAAG CAGGATGCGG CCTATAAAGA AGCCGTACTG
CCAGCCAGCG TCACAAAACG TGTGGCCGTA GAAGCGGGTA TTGCCGATTA CTGGTATAAG
TATGTGGGTC TGAACGGCCG CATCATCGGC ATGACCAGCT TCGGCGAGTC AGCGCCAGCC
AATCAGCTGT TTGAAATGTT CGGCTTCACC GTCGACAAGG TGGTTGCCGC CGCCGAAGAG
CTGCTGGGTT AA
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| Protein sequence | MSRKELANAI RALSMDAVQK ANSGHPGAPM GMADIAEVLW RGHLKHNPTN PQWADRDRFI
LSNGHGSMLH YSLLHLAGYD LSIEDLKQFR QLHSRTPGHP EYGYAPGIET TTGPLGQGIT
NGVGMAIAEK VLAAQFNRDG HDIVDHYTYV FMGDGCLMEG ISHEACSLAG TLGLGKLIAF
WDDNGISIDG HVEGWFTDDT PKRFESYGWH VIAGVDGHDA DAIDAAIKAA KADPRPTLIC
CKTIIGYGSP NKSGSHDCHG APLGDAEIAA AREFLGWKHD PFVIPADIYA QWDAKEAGIA
SEKAWDEKFA AYAAAYPELA AEYQRRVKGE LPANFATEAQ AYIEKLQNNP ANIASRKASQ
NALEAFGAML PEFLGGSADL APSNLTMYSA SKSITGADAS GNYLHYGVRE FGMTAIINGI
ALHGGFVPYG ATFLMFMEYA RNAMRMAALM KVQNIQVYTH DSIGLGEDGP THQPVEQIAS
LRVTPNMSTW RPCDQVESAV AWKYAIERKD GPTSLIFSRQ NLAQMPRSAE QLANVAKGGY
VLVDSAAAPE LIIIATGSEV ELAVKAQAEL TAKGKQVRVV SMPSTDVFDK QDAAYKEAVL
PASVTKRVAV EAGIADYWYK YVGLNGRIIG MTSFGESAPA NQLFEMFGFT VDKVVAAAEE
LLG
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