| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2758 |
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| Symbol | |
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| ID | 4605005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3297714 |
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| End bp | 3298730 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782169 |
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| Product | erythrose 4-phosphate dehydrogenase |
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| Protein accession | YP_928630 |
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| Protein GI | 119775890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTG TTGCTATCAA TGGTTATGGC CGCATCGGCC GCTCCGTGCT GAGGGCGCTT
TATGAGTCCG GCAAACGGGG CCAGATGCAG CTGGTCGCCA TTAATGAACT GGCCAAGCCC
GAGGCCATAG TTCACCTGAC CAATTACGAC ACCACCCACG GCCGTTTCCA TACCCGTGCC
AGCCTCGATG AAGGCATGAT GCATCTGGGG AATGACGCCA TACGTTTACT TGCCATCGAA
GATGCCGCTG CGCTGCCCTG GCAGGCGCTG GATGTAGACT TGGTGTTCGA ATGCACAGGC
GCCCTCAATG ACAGACAAAG CGCCGAAGCC CATATTACTG CCGGTGCCCG CAAGGTACTG
ATAAGTCATC CGTCTTCTGC CGATGTCGAT GCCACCATCG TCTATGGTGT CAACGACGCC
AGCCTCAAAG CCACAGATAC CGTTGTCTCC AACGCCTCCT GCACCACCAA TTGTCTGGTG
CCGGTCATCG ACGTGCTCGA CCGCCACTTT GGCGTGAAGA GCGGTGCCAT CACCACCATT
CACTCGGCCA TGAACGATCA GCAGGTGATT GATGCCTACC ATGATGACCT GCGCCGCACC
CGCGCCGCCA GTCAGTCGAT TATTCCGGTG GACACCAAGC TCGCCCGCGG GATTGAGCGC
ATTTTGCCGC AGATGAAAGA CAAGTTTGAG GCCATTTCGG TGCGGGTGCC TACAATAAAC
GTCACCGCCA TCGACCTCTC GGTGACCCTG GATACCCGGG TAGATATCGC TACCGTGAAT
GCGGCGCTCA AGGCCGCCGC CGATGGCAGT GCCAGCGGCA TACTGGGCTA TACCGATGAG
CCTCTGGTAT CATGTGACTT TAACCATGAC CCGCGCTCCA GCGTGGTGGA TGGTACCCAG
ACCCGTGTCA GCGCCGGGCA TCTGGTGAAA ATGCTGCTTT GGTGCGACAA CGAGTGGGGT
TTTGCCAACC GCATGCTCGA TACCGCCCTG GCCATGGCGG CCACACAGGC TGAATGA
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| Protein sequence | MIRVAINGYG RIGRSVLRAL YESGKRGQMQ LVAINELAKP EAIVHLTNYD TTHGRFHTRA
SLDEGMMHLG NDAIRLLAIE DAAALPWQAL DVDLVFECTG ALNDRQSAEA HITAGARKVL
ISHPSSADVD ATIVYGVNDA SLKATDTVVS NASCTTNCLV PVIDVLDRHF GVKSGAITTI
HSAMNDQQVI DAYHDDLRRT RAASQSIIPV DTKLARGIER ILPQMKDKFE AISVRVPTIN
VTAIDLSVTL DTRVDIATVN AALKAAADGS ASGILGYTDE PLVSCDFNHD PRSSVVDGTQ
TRVSAGHLVK MLLWCDNEWG FANRMLDTAL AMAATQAE
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