Gene Sama_2750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2750 
Symbol 
ID4604997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3289078 
End bp3289896 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content54% 
IMG OID639782161 
Productcytochrome c, putative 
Protein accessionYP_928622 
Protein GI119775882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG ACAGACGACA GGCGCTCGGA CAAATTATCG GACTGGGCAG TGCAGCAGGC 
CTTGGCCTGG TCAGTACTTC ACTGATGGCG GCAACCGACG AGAACGGTAA CTATCAGCTC
GCCCTCGGTG AAAAACTCAA ATATGTACCG CTGGATCCCA TGGCCACCGC CAAGCTGGCC
TATGAAACCG GTGGCGGCTG TATGCACCAG GTATTCCATG CCACTGTCAC CATGTTGGCC
AATTCTGCCA GTGTGGATGC CGACAAGTTC AAGTCCATTC CCACCGCACT TGCAGGTTAT
GGTTTTGCCG GGGTAACGGG TCAGGGCACC CTGTGTGGTA ACCTCAACGC CATTGGTATG
CTGGTCAATC TTCTGGACGA CATCAACGGA CAGAACGCCG CCGTGATTGG CGCTGCCTTC
CGTTGGTATG AAAACACCAA ACTGCCATTG GATACTGCGG AATTTATTGC CGGTATTGGC
TCTACAGCTG AAAAGACTGA ACTGGTTGTC AGCTCATCGG TAGCTAACAG CGTATTGTGC
CACTCCTCCA TCAGTAACTG GTCCAAGGCA TCCGGCAAAA CCTTCAGCCA GAAAGGCGAG
CGCTGCTATC GCTTGTCTGC TTCCATGGCC TATCACCTGG TTGAACTCCT GAACCGTGCC
TACAAGGGCG AAGTCATTTC CGGTATCCCT GAAGCCAAAC CTTCCGAAGA AGCCCAGCGC
TGCCAGACCT GTCACGGCAG CACAGAGACC ATGGGCCCGG CGGCCAGCGT TAAAACCGAC
ATGGAATGCA CCACCTGTCA TACCGGCCAC TTCAATTAA
 
Protein sequence
MKIDRRQALG QIIGLGSAAG LGLVSTSLMA ATDENGNYQL ALGEKLKYVP LDPMATAKLA 
YETGGGCMHQ VFHATVTMLA NSASVDADKF KSIPTALAGY GFAGVTGQGT LCGNLNAIGM
LVNLLDDING QNAAVIGAAF RWYENTKLPL DTAEFIAGIG STAEKTELVV SSSVANSVLC
HSSISNWSKA SGKTFSQKGE RCYRLSASMA YHLVELLNRA YKGEVISGIP EAKPSEEAQR
CQTCHGSTET MGPAASVKTD MECTTCHTGH FN