| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2745 |
|---|
| Symbol | |
|---|
| ID | 4604992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 3282978 |
|---|
| End bp | 3283616 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639782156 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928617 |
|---|
| Protein GI | 119775877 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAA TGGACGCCAC CGCCGCTCAC CACACCTCCC CAAACGCCAC TCTCGTTTAC
GATATTCGCC ACAGCCGCTA CCTCAATATC ACCGGCCGCT GCACCCTCAG ATGCGGCTTT
TGCCCCAAAC AGCAGGGCAG CCGCCAAATA CATCAATATC AGCTGGCATT GGACAAGCAG
CCCGGTGTCG ATGACTTGTT GCCCTTGCTT GGGGATGTGG ACACCTTTGA TGAATATGTG
TTTTGTGGCT ATGGCGAGCC TACGCTGAAC CTGCCTACCC TGCTCGGGGT TGCCCGCGCC
ATCAAGTCGC AGGGCGGCCG CATCAGGGTC AATACCGATG GCTTGGGAAA CCTGTTTCAT
AAACGCAATA TACTGCCGGA ACTGGCCGAC TGCGTGGATG CGCTCTCAGT ATCCCTCAAT
GCCCAGGATG AGTTCACCTA CCTGAAACAC TGTCAACCGA GACTCAAAGG TTCCTGGCAG
GCGGTGAATG ACTTTATCCG CATGGCACCG GCTTACATCA AACGCGTCGA GGTTTCCGCC
ATCGATGGCC TGCCCGGAGT CGATATCCCG GCCTGCCGCG CGCTGGTGGA AGCGGCGGGC
TGCACCTTCA AGCATCGCAA GCTGGATATC ATGGGATAG
|
|---|
| Protein sequence | MNSMDATAAH HTSPNATLVY DIRHSRYLNI TGRCTLRCGF CPKQQGSRQI HQYQLALDKQ
PGVDDLLPLL GDVDTFDEYV FCGYGEPTLN LPTLLGVARA IKSQGGRIRV NTDGLGNLFH
KRNILPELAD CVDALSVSLN AQDEFTYLKH CQPRLKGSWQ AVNDFIRMAP AYIKRVEVSA
IDGLPGVDIP ACRALVEAAG CTFKHRKLDI MG
|
|---|
| |