Gene Sama_2737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2737 
Symbol 
ID4604984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3270060 
End bp3271784 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content57% 
IMG OID639782148 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_928609 
Protein GI119775869 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTACA AGCTCACCAG GCGCGAAACG GTGGATGACT CCCACCTGCC AAATCACCTG 
CATCCTTTGA TAAAGCAGCT GCTTGCCCGC CGTGGGGTAG CTGGCGATGA CTGCGAGCAG
GAGCTGTCGC GCCTGCTGCG ACCCGAGACT ATGCTGGGTC TCGATAGGGC CGCGTGCCTG
TTGGCCGACG CTGCGATGGC CTCAAAGCGT ATGCTGATTG TCGGTGACTT TGATGCCGAC
GGTGCCACTT CCACCAGTGT GTGTTTGCTG GCACTCAAGA TGCTCGGTAT TCACGGCGCT
GATTTTCTTA TTCCCAACCG CTTCGATTAT GGTTATGGCC TCAGTGTGCC CCTGGTGGCC
CTCGCGGTGG AAAAGGGCGC CGAGGTGCTT ATCACGGTCG ACAATGGTAT CAGCAGCATC
GAAGGTGTTG CGGCGGCCAA AGCCGCCGGG ATGCAGGTGG TGATCACCGA CCACCATCTG
CCCGGGCAGG TATTGCCGGA CGCCGACGCC ATAGTTAACC CCAATCAACA GGGGTGCACC
TTTGCCAGCA AATCCATTGC CGGTGTGGGT GTGGCCTTTT ATCTGATGCT GGCCCTTCGC
GCCGAACTCA GACGCCGTGG CTGGTTTGAA AAGCTTGGTA TAAAGGAGCC CAATCTGGCG
GTACTGGTGG ACATAGTAGC GCTGGGGACT GTGGCCGACG TGGTCAGTTT GGATGCCAAT
AACCGGATTC TGGTGGATGC CGGGCTTAAA CGTGTCAGAG CTGGCCGTTG CAGACCCGGG
ATCACTGCGC TTTTGGAAGT CGCGAAGCGT AATCCCGCCC GCGCAGTGGC TGCTGACTTT
GGCTTTGCCG TTGGGCCCAG ACTCAATGCT GCCGGGCGCC TCGATGAAAT GTCTCTGGGC
GTCGAAACCC TTTTGTGCGA CGACATCATG TATGCCCGCA GAATGGCGGC CGAGCTGGAT
GGGCTTAATC AGGAGCGCCG CGAGCTGGAA ACCGGTATGC AGGCCGAGGC ATTAAAGAGC
CTCGAGCGCT TGCAACTGGA AGAATCGCAA CTGCCCTGGG GCATAGCCCT GTATCAGGAT
GACTGGCATC AGGGGGTGAT AGGCATTCTG GCGTCCCGTA TCAAAGACAA ATACCACAGA
CCCGTTATTG CCTTTGCTGA AGCGTCGGAT AACGAGGTAA AGGGCTCGGC CCGCTCCATC
AAGGGTCTGC ATATGCGAGA CTTGCTGGAG TTGATTTCCA GCCGTCATCC CGGGCTTATT
CCCAAGTTTG GCGGCCATGC CATGGCAGCA GGTTTGAGTC TCGCCAAAGC GGATGTCAGC
AAGTTTCAGA CAGTGTTTGA TGACACTGTT CGGGAGCTTC TTTCCCCTGA ACTGCTGACA
GGTGAAATCC TCTCCGATGG CGAGTTGCCC ATCGAATACC TGACGCTGGA AACCGCGAAC
CTTATCCGTG CCAGCGGGCC CTGGGGACAG GGCTTTGAAG AGCCATTGTT TGATGGCCAT
TTCAGGTTGT TACAGCAGCG TCTTGTGGGT GAGAAGCACT TAAAAATGAT GGTGGAAACA
GAGTGTGGCC GGCTGATGCT GGATGCCATT GCCTTCAACG TGGACCTTAA ACTCTGGCCC
GATGCCACGG TGCGCCATGT GCACCTTGCT TATCGCCTTG ATGTGAACGA GTTTCGTGGC
AACCAAAGCC TGCAGCTCTT GGTCGAGCAA ATCGACGCCA AATGA
 
Protein sequence
MKYKLTRRET VDDSHLPNHL HPLIKQLLAR RGVAGDDCEQ ELSRLLRPET MLGLDRAACL 
LADAAMASKR MLIVGDFDAD GATSTSVCLL ALKMLGIHGA DFLIPNRFDY GYGLSVPLVA
LAVEKGAEVL ITVDNGISSI EGVAAAKAAG MQVVITDHHL PGQVLPDADA IVNPNQQGCT
FASKSIAGVG VAFYLMLALR AELRRRGWFE KLGIKEPNLA VLVDIVALGT VADVVSLDAN
NRILVDAGLK RVRAGRCRPG ITALLEVAKR NPARAVAADF GFAVGPRLNA AGRLDEMSLG
VETLLCDDIM YARRMAAELD GLNQERRELE TGMQAEALKS LERLQLEESQ LPWGIALYQD
DWHQGVIGIL ASRIKDKYHR PVIAFAEASD NEVKGSARSI KGLHMRDLLE LISSRHPGLI
PKFGGHAMAA GLSLAKADVS KFQTVFDDTV RELLSPELLT GEILSDGELP IEYLTLETAN
LIRASGPWGQ GFEEPLFDGH FRLLQQRLVG EKHLKMMVET ECGRLMLDAI AFNVDLKLWP
DATVRHVHLA YRLDVNEFRG NQSLQLLVEQ IDAK