| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2709 |
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| Symbol | |
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| ID | 4604956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3241154 |
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| End bp | 3242200 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782120 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
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| Protein accession | YP_928581 |
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| Protein GI | 119775841 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.95991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TTGGATACGC AGCCCAATCT GCATTAAGCC CCTTAGCACC ATACGAATAC
ACATGCCGTG AGCTAAGGGA GGATGACGTT GCCATTGAAA TACTCTACAG CGGCGTGTGC
CACAGCGATT TACACACAGT GAAAAACGAC TGGGGGTGGA CAGTTTATCC CACGGTACCC
GGGCACGAGA TTGTTGGCCG TGTCGTCGAC ATTGGCGCCA GCGTCACTCA GTTCAGGATT
GGTGACAATG TCGCCGTAGG CTGCATGGTC GACAGCTGTC AGACCTGTTC TCACTGCCAC
AGTGGTGAAG AGCAATTCTG CGAGCAGGGA TTTACCCAAA CCTATAACAG CGCCGAAAGG
CACAGCGGGG AAATCACCAA AGGGGGTTAC GCCAGACACA TAGTCGTGCG GCAGGAGTTT
GTACTCCAGA TCCCGCCATC TCTGGATCTT GCCAGGGCTG CCCCACTGCT GTGTGCCGGT
ATTACCACCT ACTCGCCTCT GAGAACCTGG CAGGTCGGCC CGGGCAGCCG TGTGGCGGTA
ATTGGCATGG GCGGTCTCGG TCATATGGCA ATTAAACTGG CCGTCGCAAT GGGTGCACAT
GTCACCGTCA TCAGCCGCAC TGCTGACAAA CGCGCGGATG CCATGCAACT GGGCGCCAAT
GAGTTTCTCA TTTCAAGTGA GACAGAGAGT ATGCAGCAGG CAGCAAACCG CTTTGAGCTC
ATCCTGGATA CCATTCCGGT AAAACACGAC GTGACGCCTT ACATGCCCTT GCTCAAGGTC
GATGGCACCC TGACCCTGGT GGGCCAGGTG GGCCCGATGG CAGAAGTGAA TACCGTGCCC
ATGATCATGG GACGCAGGCG CATTGCCGCC TCCCTGATTG GCGGAATCGC CGAAACACAG
GAGATGCTGG ACTTTTGTGC CCGGATGAAC ATCTTGCCCG AGGTTGAAAT GATCACCATG
GAGCAGATAA ACGACGCATT CGAGCGGCTT GAAAAGTCAG ACGTACACTA CCGTTTTGTC
ATCGATATGC AGGCGTCCAG GTTCTGA
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| Protein sequence | MKTIGYAAQS ALSPLAPYEY TCRELREDDV AIEILYSGVC HSDLHTVKND WGWTVYPTVP
GHEIVGRVVD IGASVTQFRI GDNVAVGCMV DSCQTCSHCH SGEEQFCEQG FTQTYNSAER
HSGEITKGGY ARHIVVRQEF VLQIPPSLDL ARAAPLLCAG ITTYSPLRTW QVGPGSRVAV
IGMGGLGHMA IKLAVAMGAH VTVISRTADK RADAMQLGAN EFLISSETES MQQAANRFEL
ILDTIPVKHD VTPYMPLLKV DGTLTLVGQV GPMAEVNTVP MIMGRRRIAA SLIGGIAETQ
EMLDFCARMN ILPEVEMITM EQINDAFERL EKSDVHYRFV IDMQASRF
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