| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2706 |
|---|
| Symbol | |
|---|
| ID | 4604953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 3238559 |
|---|
| End bp | 3238990 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639782117 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928578 |
|---|
| Protein GI | 119775838 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.867107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAT GGTATTTATC CCACCAGGGT GAAATCAGCG GCCCCTTCGG ACTGACTGAA
GCCAATCTGT TTATCGCTGC CCATCCAGAC AGTTACGCCT GGGAGCCATC GTTTGCCCAG
TGGGTACCGG TAAGCCACAT CGACGAGTTT GAGCTTAAGC TAACGCCACC GCCGCCCCCC
AAAGCGGTGC CTGAGACCCT GATTGAGCGC GTATTTGCCA AAGAGCAGGG ACTGAAGCAG
TCGCTGGAGC CCATCGCTGC CAGCCTGACG TCACTGCAGC AAAGCCTGTC CACACTCGGT
GCCGATATCA AGGGCAGCAA AACGGTTACT CAGAGCCTGA ATCAAGAGGT CAATCAGACA
CTGCGCACCA TCAATGAGCA GTATGAGGCG TTGCAGAAAA AGCTGGCTGG TTTTGCCGTA
AGACAAGGCT AA
|
|---|
| Protein sequence | MKEWYLSHQG EISGPFGLTE ANLFIAAHPD SYAWEPSFAQ WVPVSHIDEF ELKLTPPPPP
KAVPETLIER VFAKEQGLKQ SLEPIAASLT SLQQSLSTLG ADIKGSKTVT QSLNQEVNQT
LRTINEQYEA LQKKLAGFAV RQG
|
|---|
| |