Gene Sama_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2702 
Symbol 
ID4604949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3233045 
End bp3234166 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content52% 
IMG OID639782113 
Producthypothetical protein 
Protein accessionYP_928574 
Protein GI119775834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAC CGGCACTTAC TTCTCAGATA AAGATGAAAA TCTCGGGACT CTTTAATCGT 
CCCTTCGCTC AACCGTTCAC CCGCATCCTC TCTGGCCTGA AACAATTCTG GCACAGCCTT
AACTTTGCCC AGCGTTGCTA TGTGACGGCC ACGTTATTGC TGCTGATTGA AACTGTGCTG
ATGCTGGATT TGGGGCCCTG GTTCCTTGGC CTGATGTCTG TGTTGGTGCT CACTGGCCTG
GTGAGTGAGT TCTGGCCACG CTTTTTGCAC GTGTGGCACA GTTTACCAGG TAAGGCGCTG
ATTTTGCTGT TTTATGCGGT AGTTGCCAAC TTTGCTCTGG GTAACGCCGC AGGCATGGTC
AATGAGGTGA CCGGGGTGGC GGCATCCAGT TTGCCCTACA GTCATAACTT CGCGATTTTA
CTCAGTCTGC CGGGGTGGTT TTTTATCACC TCGCTGCTGA TGTTACTGCT GGCCCAGGTG
GCCATGCCCT TTTACCTGTT GCTGCTGTTA TTGCTCAAAC CCTTTGGTAT TCATGCCCTC
TGGCATCCTC CCCATTACCG CTTTGTGTTC ACCACTGCTC TGGTTCGTTG GTTTTGGAGT
ATCGCGCTGC TTATCCAACT CTTGATGCTG GGGGCCTTTA CCGGTGTGGG CTCAGACTCC
AGTGCCTTTA CGTCGGGTTT ATACGAAGGA TTTTTCGCGG CCGATGAAAA AGTGCAAAAA
AAGGTGATAG ACACCGGGAT ATTGCCCACC CCTGCTGAAG ACTCAACGGC GAGTACTGCC
TCGGGGGCCG TGTCAGACGC TGTGACCGAA GAGCTTGATA ATTCTGACGG CAGCTTTGGC
GTACATATTA CCCGCGACGG AGAAACCTCC AATCTGGCGT CCATGCCGGT GCGTGAGATG
AAGGACAGGG CCGAGCGCTA CCACAGCTTA CAGCAGTCGA TGCTGGCGTA TTTTATTTAT
GTATATGAAT CAGATAGCCG CTCCCGTTGC CAACATACCG AAGGCAGCAA GGTGGTGGAG
CTGAATGACT ATGAAATTCT GGAAGTCCTG AAAGACGACA GTATTCCTTT GGGGTACAGC
TACAGCGTTA AACGCTGTAT TTCGCCAGCC TTTGGCCAAT GA
 
Protein sequence
MELPALTSQI KMKISGLFNR PFAQPFTRIL SGLKQFWHSL NFAQRCYVTA TLLLLIETVL 
MLDLGPWFLG LMSVLVLTGL VSEFWPRFLH VWHSLPGKAL ILLFYAVVAN FALGNAAGMV
NEVTGVAASS LPYSHNFAIL LSLPGWFFIT SLLMLLLAQV AMPFYLLLLL LLKPFGIHAL
WHPPHYRFVF TTALVRWFWS IALLIQLLML GAFTGVGSDS SAFTSGLYEG FFAADEKVQK
KVIDTGILPT PAEDSTASTA SGAVSDAVTE ELDNSDGSFG VHITRDGETS NLASMPVREM
KDRAERYHSL QQSMLAYFIY VYESDSRSRC QHTEGSKVVE LNDYEILEVL KDDSIPLGYS
YSVKRCISPA FGQ