| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2687 |
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| Symbol | |
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| ID | 4604934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3215921 |
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| End bp | 3217522 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782098 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_928559 |
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| Protein GI | 119775819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.915441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG CCTCACTGGG CCTGTCGGCG CCCATCCTCA AAGCCCTCGA TCATAAGGGC
TATAAAACCC CGTCTCCCAT TCAGGCCCAG GCCATTCCTG TAGTGCTTGA AGGACGGGAT
TTGCTCGCCG CCGCTCAGAC TGGTACCGGC AAAACCGCAG GCTTTACCCT GCCCTTGCTC
GAATTGTTAT CCCAAACCCA AAAGGCCGGC CCCAAGCAGG TGCGCGCCCT TATCCTGACT
CCCACCCGGG AGCTTGCGGC GCAAATCGCC GATAACATCA CCGCTTACAG CAAGTATCTG
CCGCTGAAAA GCACCGTGGT ATTTGGTGGG GTAGGTATTG GCCCGCAGAT CACCACCCTG
CGCCGTGGCA TCGACATCCT GGTGGCAACG CCGGGCCGCC TGCTGGATTT GCATCAGCAA
AACGCCGTCA GCTTCCATGG TCTGGAAATT CTGGTGCTGG ACGAAGCCGA CCGCATGCTG
GACATGGGCT TTATCCACGA CATCAAACGC ATCCTGAAGC TGCTGCCTGC CAAGCGTCAA
AACTTGCTGT TTTCGGCTAC TTTCTCCCCT GAAATCCGCA CCTTGGCCCA TGGACTGTTG
CACAATGCCG CCGAGGTATC TGTTACCCCG AGAAACAGCG CCGCCGAAAG CGTCAAGCAG
TGGATAGTGC CGGTGGACAA AAACCAAAAG CCGGCCCTGC TTGCCGAGCT GACCCGTTTT
TACCGCTGGC AGCAGGTACT GGTATTTTGC CGCACCAAGC ACGGCGCCAA CCGTCTGGTA
CGCCAGATGG ATGCCGAAGG CATCAAGGCT GCGGCCATCC ATGGTAACAA GAGTCAGAAC
GCCCGCACCC AGGCGCTGGC CGACTTCAAA CGCGGCGCCA TTCGCATGCT GATTGCCACC
GATATTGCGG CCCGCGGTAT CGATATCAGT GAATTGCCCA ACGTGGTCAA CTTCGAGCTG
CCCCACGTAC CGGAAGACTA CGTACACCGC ATTGGCCGTA CCGGCCGCGC CGGTGCCAGC
GGTGAAGCGG CCTCTTTGGT TTGCAATGAA GAAGCCAAGC AACTCAGAGA CATTGAGCGA
CTGATTAAGC AGTCACTGCC CCGCAAAGAG TTTGTGGGTT TTGAACCTGT TCACGGCCTG
CCCCCCAGTG AAAATCAGGG CAAGTCCAAG CCAGGTGGAA GTAAGCAAGG CGCCAAGCCC
GGCAATAAGA GCCAGGGACG AAAGCCTCAG GGCCAGAGCC GCAATGCCCA GCCAAAGCAG
CGCCAGGGAA GCCGGGCACA GGAAGAGCGC AGTCAGCAGG ACAAAAATCC ATCTCGCAGC
GAACAGCCAC GCCGTGAAAG AAGGGGTAAC GACCAGGCTC GCAGTGAAAG GCCCCACAGC
GCCAGGGCTC ATGGTGATAA AGCTCGTAGC GACAACGCTC GTAGCGAAAA CGGCCGCAGC
GATGCCCGCA CTGACAGCGC TCGAAACGAC AAGCCCCGCA GCGACCGCCC GAACACTGAC
AGAGCTGCCA GCAACAAGCC CCGCAGCGGC AATCGCCCCC AGGGACAGGG CCAGCAGCGG
CCCCGCAGTA GTGCCAAAGG TGGCGAGCGC AATCAGGGCT AA
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| Protein sequence | MSFASLGLSA PILKALDHKG YKTPSPIQAQ AIPVVLEGRD LLAAAQTGTG KTAGFTLPLL
ELLSQTQKAG PKQVRALILT PTRELAAQIA DNITAYSKYL PLKSTVVFGG VGIGPQITTL
RRGIDILVAT PGRLLDLHQQ NAVSFHGLEI LVLDEADRML DMGFIHDIKR ILKLLPAKRQ
NLLFSATFSP EIRTLAHGLL HNAAEVSVTP RNSAAESVKQ WIVPVDKNQK PALLAELTRF
YRWQQVLVFC RTKHGANRLV RQMDAEGIKA AAIHGNKSQN ARTQALADFK RGAIRMLIAT
DIAARGIDIS ELPNVVNFEL PHVPEDYVHR IGRTGRAGAS GEAASLVCNE EAKQLRDIER
LIKQSLPRKE FVGFEPVHGL PPSENQGKSK PGGSKQGAKP GNKSQGRKPQ GQSRNAQPKQ
RQGSRAQEER SQQDKNPSRS EQPRRERRGN DQARSERPHS ARAHGDKARS DNARSENGRS
DARTDSARND KPRSDRPNTD RAASNKPRSG NRPQGQGQQR PRSSAKGGER NQG
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