| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2679 |
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| Symbol | |
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| ID | 4604926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3207150 |
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| End bp | 3208943 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782090 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_928551 |
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| Protein GI | 119775811 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAT CCCTCGAAAA ACAACTCGCT CTCTGGCTTA AATCCCGTAA GGCCGCCTGT
GGTCCTTTTC TGCTGCTGAG TGTTGCGCTT GGTCTGTTCG CCGGTTTGTT ACTCATAGGC
CAAGCCTGGT TACTTGCCCG CATGCTGAGC GCGGTGGTGA TGCAGGGCGA AACTATTCAA
GCCCTCGGGG CTGAAATAGC TGCGCTGCTG GGGCTAATCA TTGCCCGCGC GATTGTTGCC
TGGGCCCGTG AGCGGGTTAG CTTTGAAGCG GGGCGCCGTC TTAGAACTGA ACTCAGGGCC
GCTGTACTAA ACCATCTCTC GGCACTGGGA CCTGCCTTTA TCAAAGGTAA ACCCCTTGGC
AGCTGGGGCG CCGTGGTGCT TGAACAAATC GAAGATTTAC ACGACTTTTA CGCCCGTTAT
CTGCCGCAGT TGTCGCTCGC TGCCCTTATC CCTTTGGTGA TCCTGGCCTG CGTGTTTCCG
CTGAACTGGG CCGCCGGTCT GATTTTGTTG GGGACAGCGC CGCTTATTCC GCTCTTTATG
ATCCTGGTTG GCATGGGCGC CGCCGATGCC AACCGTAAGC ACTTTGCCGC ACTGTCGAGG
CTGTCAGGGC ATTTTATGGA CAGGCTCAGG GGCATAGTTA CCCTGCGGCT GTTCGACCGG
GCCGAAGCAG AAGGGCGTGC CATCGAAAAA GCCTCCGATG AATTTCGAAG CCGCACCATG
GCCGTGCTGC GTATGGCGTT TTTAAGCTCA GCGGTTCTGG AGTTTTTTGC CGCTGTCAGC
CTGGCTCTGG TCGCGGTTTA TTTCGGTTTC AGCTATCTGG GGCACCTGGA TTTTGGCCAT
TACGGTCAGA GTATCAGCCT CTTTACCGGC CTCTTCGTGC TGATGCTTGC GCCGGAGTTT
TATCAGCCTC TCAGAGACAT GGGCACCCAC TACCATGCCA AGGCGCAGGC GGTGGCCGCC
GCCGAGGCGC TGTCTGAGCT GCTTGCCATC GATACAGATA CACAGCAAGG CAAGCAGCCA
TTGCCACACC ATCTCGATAT TGAAGCGCGG GATCTGTGCA TATACAGCCA TCAGGGGGCA
TTGATTGCAG GGCCGCTGTC ATTCAGCGTC AGGCAAGGGG AGCGCCTCGC CATTGTCGGG
CCGTCCGGAG CGGGTAAAAG CAGCCTGCTG CATGCGCTGC TGGGCTTTTT GCCCTGTAAA
GGGACGTTAA CCGTGGGTGG CATGCCTTTC ACCGAGCTGG ATATGGGCCA GTGGAGAGGC
GCTGTAGCCT GGCTTGGTCA AGAGCCTCAT CTCTTCCATG GCAGCATTCG CGACAACATT
GCCATGGGCA GAGCGCTTGG CGATGAGCAA ATTCAGCAGC TGCTCGCCAA GGCGCAGATA
GCGGATTTTG TGGCAGGGTC GGCCGATGGC CTGTCGCACG CCATCGCCGA AGGAGGCGGC
GGCGTGTCTG TGGGGCAAGC CCAGCGGCTG GCGCTGGCAC GAGCTCTGGC AGGGCAGCCC
CAAGTCTTCC TGCTGGATGA ACCCGGCGCC AGCCTGGATG TGGACAGTGA GCGCAAGGTG
ATGGAAAGCA TCATGCGGGA GAGTGAGGGC CTGAGCCTGG TCATGGTCAG CCATCGCCTA
GAAGCGCTGA CCCAGCTCGA CCGTGTACTG GTGATGGATG GCGGCGCCAT TGTGGAGTCG
GGAACGGCGA TAGAGCTTGC CAATGCCAAC GGCCTGTTTG CCGATCTCTT GTCTGAGTCG
GGGCTTGCGC GCAGCCTGGA TATCCCGATG TGTGACGGGG AGCTGAGGTC ATGA
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| Protein sequence | MDKSLEKQLA LWLKSRKAAC GPFLLLSVAL GLFAGLLLIG QAWLLARMLS AVVMQGETIQ
ALGAEIAALL GLIIARAIVA WARERVSFEA GRRLRTELRA AVLNHLSALG PAFIKGKPLG
SWGAVVLEQI EDLHDFYARY LPQLSLAALI PLVILACVFP LNWAAGLILL GTAPLIPLFM
ILVGMGAADA NRKHFAALSR LSGHFMDRLR GIVTLRLFDR AEAEGRAIEK ASDEFRSRTM
AVLRMAFLSS AVLEFFAAVS LALVAVYFGF SYLGHLDFGH YGQSISLFTG LFVLMLAPEF
YQPLRDMGTH YHAKAQAVAA AEALSELLAI DTDTQQGKQP LPHHLDIEAR DLCIYSHQGA
LIAGPLSFSV RQGERLAIVG PSGAGKSSLL HALLGFLPCK GTLTVGGMPF TELDMGQWRG
AVAWLGQEPH LFHGSIRDNI AMGRALGDEQ IQQLLAKAQI ADFVAGSADG LSHAIAEGGG
GVSVGQAQRL ALARALAGQP QVFLLDEPGA SLDVDSERKV MESIMRESEG LSLVMVSHRL
EALTQLDRVL VMDGGAIVES GTAIELANAN GLFADLLSES GLARSLDIPM CDGELRS
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